RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PET100P0DJ07 73 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 IL11P20809 199 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 CXCL12P48061 93 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 TAS2R46P59540 309 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 ECH1Q13011 328 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 SFRP5Q5T4F7 317 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 FAM69BQ5VUD6 431 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 OPN5Q6U736 354 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 TMEM185AQ8NFB2 350 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 GJC3Q8NFK1 279 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 NKD1Q969G9 470 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 WBP1Q96G27 269 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 OCSTAMPQ9BR26 566 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
CPSF7-223ENST00000544669 TRANK1O15050 2925 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 LOC105371267A0A1B0GV96 52 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 MTRF1O75570 445 aaKnown RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 NAAAQ02083 359 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 UNC119Q13432 240 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 IL11RAQ14626 422 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SURF2Q15527 256 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 EXT1Q16394 746 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 MOGAT2Q3SYC2 334 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PAN3Q58A45 887 aaKnown RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 CORO6Q6QEF8 472 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TMPRSS9Q7Z410 1059 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 ABHD12BQ7Z5M8 362 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 COMMD2Q86X83 199 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 FADS6Q8N9I5 356 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 OR13C9Q8NGT0 318 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 LHFPL5Q8TAF8 219 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PP6455Q8WZ26 134 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 FBXW5Q969U6 566 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PMEPA1Q969W9 287 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 CLDN23Q96B33 292 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 ADAT3Q96EY9 351 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 NECAB3Q96P71 396 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 ARPC5LQ9BPX5 153 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 WDR77Q9BQA1 342 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TMEM59Q9BXS4 323 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SELENOIQ9C0D9 397 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PIGMQ9H3S5 423 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TMEM185BQ9H7F4 350 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 UBE2ZQ9H832 354 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 VSIG4Q9Y279 399 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 LHFPL6Q9Y693 200 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 A0A0U1RQV5 110 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 C17orf51A8MQB3 221 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SULT2B1O00204 365 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 EFSO43281 561 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TRAF3IP2O43734 574 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SPDEFO95238 335 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 HCKP08631 526 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 CD63P08962 238 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 HOXD4P09016 255 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 HIST1H1DP16402 221 aaKnown RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SDHBP21912 280 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PSMB6P28072 239 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 THBS4P35443 961 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 FOXK1P85037 733 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 CCDC157Q569K6 752 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 OR10K2Q6IF99 312 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 GLIPR1L1Q6UWM5 242 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 SHISA6Q6ZSJ9 500 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TMPPEQ6ZT21 453 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 MOB3CQ70IA8 216 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 POC1BQ8TC44 478 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 OR51E1Q8TCB6 317 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 PPP1R1CQ8WVI7 109 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TMEM41AQ96HV5 264 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 OR5B2Q96R09 309 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 GPER1Q99527 375 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 S100A13Q99584 98 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 VRK1Q99986 396 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-223ENST00000544669 LDAHQ9H6V9 325 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 GAREM1Q9H706 876 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 FBXL2Q9UKC9 423 aa11.56□□□□□ -0.56
CPSF7-223ENST00000544669 TDRD6O60522 2096 aaKnown RBP11.55□□□□□ -0.56
CPSF7-223ENST00000544669 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 CCDC163A0A0D9SF12 145 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 GJE1A6NN92 205 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 SERPINE3A8MV23 424 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 DNPH1O43598 174 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 WISP1O95388 367 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 DCNP07585 359 aaKnown RBP11.55□□□□□ -0.56
CPSF7-223ENST00000544669 PRF1P14222 555 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 EPHA8P29322 1005 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-223ENST00000544669 HRH1P35367 487 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 DLSTP36957 453 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 PTGDSP41222 190 aa11.55□□□□□ -0.56
CPSF7-223ENST00000544669 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-223ENST00000544669 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-223ENST00000544669 PPP1R1AQ13522 171 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms