RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	OR14I1	A6ND48	311 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	CD63	P08962	238 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	CTLA4	P16410	223 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	MNDA	P41218	407 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	DCAF7	P61962	342 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	MFGE8	Q08431	387 aa	Predicted RBP	13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	ZNF440	Q8IYI8	595 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	MUC20	Q8N307	709 aa	Predicted RBP	13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	ZNF441	Q8N8Z8	693 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	OR51D1	Q8NGF3	324 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	LIPH	Q8WWY8	451 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	CDC6	Q99741	560 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	STRADB	Q9C0K7	418 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	ELOVL3	Q9HB03	270 aa		13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	MRPL22	Q9NWU5	206 aa	Known RBP	13.37	□□□□□ -0.27
CHFR-223	ENST00000544268	DMXL1	Q9Y485	3027 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	OR6C76	A6NM76	312 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	ZNF729	A6NN14	1252 aa	Predicted RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	TERT	O14746	1132 aa	Known RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	SLC16A7	O60669	478 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	SLC25A12	O75746	678 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	NPBWR1	P48145	328 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	LUM	P51884	338 aa	Predicted RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	AKR1C2	P52895	323 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	UBE2M	P61081	183 aa	Known RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	AKR1C1	Q04828	323 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	RBMS2	Q15434	407 aa	Known RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	DCAF12	Q5T6F0	453 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	TMEM205	Q6UW68	189 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	MISP	Q8IVT2	679 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	DUSP19	Q8WTR2	217 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	INTS14	Q96SY0	518 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	TLNRD1	Q9H1K6	362 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	WDR13	Q9H1Z4	485 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	TMEM185B	Q9H7F4	350 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	WDR54	Q9H977	334 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	FAM86C1	Q9NVL1	165 aa		13.36	□□□□□ -0.27
CHFR-223	ENST00000544268	TRAV14DV4	A0A0A6YYC5	116 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268		A0A1B0GV90	55 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	SPARC	P09486	303 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	COX5B	P10606	129 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	ABO	P16442	354 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TAS2R20	P59543	309 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	CDCP2	Q5VXM1	449 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	C11orf88	Q6PI97	169 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	DHRS13	Q6UX07	377 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	PLPP7	Q8NBV4	271 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	WNT2B	Q93097	391 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TBL1XR1	Q9BZK7	514 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	LAT2	Q9GZY6	243 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	UFSP2	Q9NUQ7	469 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	PISD	Q9UG56	409 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TRBV5-5	A0A0J9YX44	114 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	LOC101059948	A0A1B0GTJ6	334 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268		A0A1W2PNU3	283 aa	Predicted RBP	13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	COLCA2	A8K830	154 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	ACOT7	O00154	380 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TSPAN2	O60636	221 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TXNDC12	O95881	172 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	CD1A	P06126	327 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	ITGA5	P08648	1049 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	CBR1	P16152	277 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	FMOD	Q06828	376 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	ZNF345	Q14585	488 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	NAA40	Q86UY6	237 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	TNFAIP8L1	Q8WVP5	186 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	PRRX2	Q99811	253 aa		13.35	□□□□□ -0.27
CHFR-223	ENST00000544268	C1orf196	B1AJZ1	125 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268		C9J4A7	227 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	BCL2L11	O43521	198 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	LMX1B	O60663	402 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	KLF7	O75840	302 aa	Predicted RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	STK17B	O94768	372 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	OR2F2	O95006	317 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	OPN1LW	P04000	364 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	ANXA2	P07355	339 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	UMOD	P07911	640 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	TACSTD2	P09758	323 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	OR2F1	Q13607	317 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	PEA15	Q15121	130 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	LIN54	Q6MZP7	749 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	S100A16	Q96FQ6	103 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	TMEM41A	Q96HV5	264 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	SEC11C	Q9BY50	192 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	GHRL	Q9UBU3	117 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	NXT1	Q9UKK6	140 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	B9D1	Q9UPM9	204 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	PTRH2	Q9Y3E5	179 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	MUC6	Q6W4X9	2439 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	TMEM272	A0A1B0GTI8	110 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	NUDT19	A8MXV4	375 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	REN	P00797	406 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	RLN1	P04808	185 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	CSRP1	P21291	193 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	FAU	P35544	74 aa	Known RBP	13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	SPCS3	P61009	180 aa		13.34	□□□□□ -0.27
CHFR-223	ENST00000544268	CBFB	Q13951	182 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms