RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PNPP00491 289 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ADRA2AP08913 450 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ANOS1P23352 680 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CRHBPP24387 322 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 C21orf33P30042 268 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PSMB10P40306 273 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MMP16P51512 607 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GK2Q14410 553 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 NKPD1Q17RQ9 610 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TMPRSS11AQ6ZMR5 421 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DTX2Q86UW9 622 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 COMMD2Q86X83 199 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SYS1Q8N2H4 156 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PIGTQ969N2 578 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TRAF4Q9BUZ4 470 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PBOV1Q9GZY1 135 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MOB1AQ9H8S9 216 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DYNLRB1Q9NP97 96 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TAAR3PQ9P1P4 343 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GPR160Q9UJ42 338 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CAB39Q9Y376 341 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CELSR2Q9HCU4 2923 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 IGLV3-9A0A075B6K5 115 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MYL12BO14950 172 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SRSF10O75494 262 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CD8AP01732 235 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CDK1P06493 297 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 HTR1AP08908 422 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 RAC2P15153 192 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 DNASE1P24855 282 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ALDH3B1P43353 468 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 EVX1P49640 407 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PRSS12P56730 875 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SLC35A2P78381 396 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ZNF92Q03936 586 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PSG7Q13046 419 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MOGQ16653 247 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SWI5Q1ZZU3 235 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MST1LQ2TV78 715 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SPRYD4Q8WW59 207 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 RORBQ92753 470 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 HAVCR1Q96D42 359 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PELI1Q96FA3 418 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CACNG6Q9BXT2 260 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 RGCCQ9H4X1 137 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OPA3Q9H6K4 179 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PAK1IP1Q9NWT1 392 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ZNF319Q9P2F9 582 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CLEC2DQ9UHP7 191 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PMF1-BGLAPU3KQ54 211 aa12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 HRNRQ86YZ3 2850 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PLSCR5A0PG75 271 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GGT3PA6NGU5 568 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 M0R233 179 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 IGHV3-13P01766 116 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 MT-ND5P03915 603 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SELEP16581 610 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CD53P19397 219 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CDKN1AP38936 164 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 GBX2P52951 348 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OR2G6Q5TZ20 316 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OR2T2Q6IF00 324 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 C11orf71Q6IPW1 123 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 OR5AS1Q8N127 324 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SGCDQ92629 289 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 G6PC2Q9NQR9 355 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ERVK-18Q9QC07 812 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 NUFIP1Q9UHK0 495 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 PURGQ9UJV8 347 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 LRRC42Q9Y546 428 aa12.4□□□□□ -0.42
TNFRSF1A-216ENST00000543995 RGS10O43665 173 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 KITLGP21583 273 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CFL1P23528 166 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 MRPL28Q13084 256 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CDH24Q86UP0 819 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 EGFL6Q8IUX8 553 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
TNFRSF1A-216ENST00000543995 GATAD2BQ8WXI9 593 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms