RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 KHDC3LQ587J8 217 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 TMEM128Q5BJH2 165 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 LRRC18Q8N456 261 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 FAM71E2Q8N5Q1 922 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ZNF610Q8N9Z0 462 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 TCTN2Q96GX1 697 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 DNAH14Q0VDD8 3507 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 RAB27BO00194 218 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 HOXA2O43364 376 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 RENP00797 406 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 CST4P01036 141 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SOD3P08294 240 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SLC35G6P0C7Q6 338 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 NHLH2Q02577 135 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SRSF5Q13243 272 aaKnown RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 SLC17A1Q14916 467 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 HEPN1Q6WQI6 88 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 TMEM184AQ6ZMB5 413 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ZNF574Q6ZN55 896 aaPredicted RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 OR2L8Q8NGY9 312 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SLC22A18Q96BI1 424 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 S100A13Q99584 98 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 FLVCR1Q9Y5Y0 555 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 HCFC2Q9Y5Z7 792 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 A0A087WUJ7 227 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 RAMP1O60894 148 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 HKR1P10072 659 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 TMEM33P57088 247 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 FOXO1Q12778 655 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ENPP2Q13822 863 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 COX15Q7KZN9 410 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 EXD3Q8N9H8 876 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 TERB2Q8NHR7 220 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 C2orf50Q96LR7 162 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 DAPP1Q9UN19 280 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 TMEM14AQ9Y6G1 99 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 GLRA1P23415 457 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 BIKQ13323 160 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 AARDQ4LEZ3 155 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 FAHD2BQ6P2I3 314 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMG8-202ENST00000543872 FAHD2AQ96GK7 314 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 C5orf66Q9H5L9 145 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 LRIT1Q9P2V4 623 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 MRPS2Q9Y399 296 aaKnown RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 POMT1Q9Y6A1 747 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 TIMP1P01033 207 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 TAS2R31P59538 309 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 DPTQ07507 201 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 MESTQ5EB52 335 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 FHL5Q5TD97 284 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 RPUSD3Q6P087 351 aaKnown RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 C17orf99Q6UX52 265 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 DGAT2L6Q6ZPD8 337 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 NAXEQ8NCW5 288 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 MALSU1Q96EH3 234 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 LMAN1LQ9HAT1 526 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 FREM3P0C091 2139 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 ZNF587BE7ETH6 402 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 CYTIPO60759 359 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SFT2D2O95562 160 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 RAB4AP20338 218 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SLC25A1P53007 311 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 RHEBQ15382 184 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 IAH1Q2TAA2 248 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 LINC00114Q6XXX2 140 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 ANGPTL5Q86XS5 388 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 OR4C3Q8NH37 302 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 AQP3Q92482 292 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
SMG8-202ENST00000543872 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 G6PC3Q9BUM1 346 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SLC26A1Q9H2B4 701 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 KCNIP3Q9Y2W7 256 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 EMC9Q9Y3B6 208 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 HDGFL3Q9Y3E1 203 aa11.32□□□□□ -0.6
SMG8-202ENST00000543872 SPAG17Q6Q759 2223 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 LRRK1Q38SD2 2015 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 TRGC2P03986 189 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 PET100P0DJ07 73 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 SERPINA2P20848 420 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
SMG8-202ENST00000543872 EGR3Q06889 387 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 RPL18Q07020 188 aaKnown RBP11.31□□□□□ -0.6
SMG8-202ENST00000543872 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 OR2T2Q6IF00 324 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms