RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 MUC15Q8N387 334 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 OR52N1Q8NH53 320 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 HAVCR2Q8TDQ0 301 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 SGCDQ92629 289 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 PELI1Q96FA3 418 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 PBOV1Q9GZY1 135 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 POFUT1Q9H488 388 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 PLK3Q9H4B4 646 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 PTTG3PQ9NZH4 202 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 NUFIP1Q9UHK0 495 aaKnown RBP14.71□□□□□ -0.06
LIG1-204ENST00000542460 DUSP13Q9UII6 198 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 FZR1Q9UM11 496 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 GTF2A1LQ9UNN4 478 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 TMEM129A0AVI4 362 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 RAC2P15153 192 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 ANOS1P23352 680 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 PSMB10P40306 273 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 EVX1P49640 407 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 KLF3P57682 345 aaPredicted RBP14.7□□□□□ -0.06
LIG1-204ENST00000542460 GABARAPL2P60520 117 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 MSMPQ1L6U9 139 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 OR2G6Q5TZ20 316 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 AGAP6Q5VW22 663 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 OR8B12Q8NGG6 310 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 SPRYD4Q8WW59 207 aaPredicted RBP14.7□□□□□ -0.06
LIG1-204ENST00000542460 SGK3Q96BR1 496 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 MRPL37Q9BZE1 423 aaKnown RBP14.7□□□□□ -0.06
LIG1-204ENST00000542460 RGCCQ9H4X1 137 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 OPA3Q9H6K4 179 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 G6PC2Q9NQR9 355 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 ZNF319Q9P2F9 582 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 OR52A1Q9UKL2 312 aa14.7□□□□□ -0.06
LIG1-204ENST00000542460 HRNRQ86YZ3 2850 aaPredicted RBP14.69□□□□□ -0.06
LIG1-204ENST00000542460 IGLV3-9A0A075B6K5 115 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 C5orf63A6NC05 138 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 B9A039 149 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 MYL12BO14950 172 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 HTR1AP08908 422 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 MPV17P39210 176 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 GBX2P52951 348 aaPredicted RBP14.69□□□□□ -0.06
LIG1-204ENST00000542460 KRTAP10-9P60411 292 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 ZNF92Q03936 586 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 GK2Q14410 553 aaPredicted RBP14.69□□□□□ -0.06
LIG1-204ENST00000542460 HLXQ14774 488 aaPredicted RBP14.69□□□□□ -0.06
LIG1-204ENST00000542460 EFNB3Q15768 340 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 TIGD6Q17RP2 521 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 GLYATL3Q5SZD4 288 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 BCL2L15Q5TBC7 163 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 FDX2Q6P4F2 183 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 PGAP1Q75T13 922 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 CATSPERDQ86XM0 798 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 NANOGP1Q8N7R0 232 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 RNF166Q96A37 237 aaPredicted RBP14.69□□□□□ -0.06
LIG1-204ENST00000542460 SPSB4Q96A44 273 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 HAVCR1Q96D42 359 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 CMBLQ96DG6 245 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 CCDC90BQ9GZT6 254 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 BABAM2Q9NXR7 383 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 ZNF391Q9UJN7 358 aa14.69□□□□□ -0.06
LIG1-204ENST00000542460 A0A0U1RQV5 110 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 MRPS14O60783 128 aaKnown RBP14.68□□□□□ -0.06
LIG1-204ENST00000542460 CLPTM1O96005 669 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 IGHV3-13P01766 116 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 MT-ND2P03891 347 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 SOD3P08294 240 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 CFL1P23528 166 aaKnown RBP14.68□□□□□ -0.06
LIG1-204ENST00000542460 IRF3Q14653 427 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 MOGQ16653 247 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 MRPL21Q7Z2W9 205 aaKnown RBP14.68□□□□□ -0.06
LIG1-204ENST00000542460 DTX2Q86UW9 622 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 LRP11Q86VZ4 500 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 ELMOD2Q8IZ81 293 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 ZNF485Q8NCK3 441 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 OR2AE1Q8NHA4 323 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 GATAD2BQ8WXI9 593 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 REEP6Q96HR9 211 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 SYT3Q9BQG1 590 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 REPIN1Q9BWE0 567 aaKnown RBP14.68□□□□□ -0.06
LIG1-204ENST00000542460 MND1Q9BWT6 205 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 CBLN4Q9NTU7 201 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 EDARQ9UNE0 448 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 LAMP3Q9UQV4 416 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 CSMD1Q96PZ7 3565 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 ROS1P08922 2347 aa14.68□□□□□ -0.06
LIG1-204ENST00000542460 TTRP02766 147 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 SELEP16581 610 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 CCR9P51686 369 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 CHN2P52757 468 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 WNT4P56705 351 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 PSG7Q13046 419 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 SWI5Q1ZZU3 235 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 GFOD2Q3B7J2 385 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 CCDC58Q4VC31 144 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 KLBQ86Z14 1044 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 PRSS35Q8N3Z0 413 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 OR2G2Q8NGZ5 317 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 PPP1R14AQ96A00 147 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 FRRS1LQ9P0K9 344 aa14.67□□□□□ -0.06
LIG1-204ENST00000542460 FBXO9Q9UK97 447 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms