RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PRORSD1PA6NEY8 169 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 E9PBE3 544 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 CHP2O43745 196 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 TRIM13O60858 407 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 BGNP21810 368 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 DLX1P56177 255 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 CAV3P56539 151 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 OR12D2P58182 307 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 MRPS25P82663 173 aaKnown RBP7.55□□□□□ -1.2
YBX3-211ENST00000541351 AQP6Q13520 282 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ZSCAN26Q16670 478 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 PLA1AQ53H76 456 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 WDR38Q5JTN6 314 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 HHATQ5VTY9 493 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ZNF613Q6PF04 617 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 SLC25A47Q6Q0C1 308 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ZDHHC24Q6UX98 284 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 C8orf86Q6ZUL3 223 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 OR2W3Q7Z3T1 314 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 KRT77Q7Z794 578 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ZNF695Q8IW36 515 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 C10orf111Q8N326 155 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 GCSAMQ8N6F7 178 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 KLHL30-AS1Q8NEE0 82 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 OR8U1Q8NH10 309 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 ADAT1Q9BUB4 502 aaKnown RBP7.55□□□□□ -1.2
YBX3-211ENST00000541351 RAD21L1Q9H4I0 556 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 RNPEPL1Q9HAU8 725 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
YBX3-211ENST00000541351 LRP12Q9Y561 859 aa7.55□□□□□ -1.2
YBX3-211ENST00000541351 IGLV1-36A0A0B4J1U3 117 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 CCL24O00175 119 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 ANP32DO95626 131 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 ASAH2BP0C7U1 165 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 NDUFB7P17568 137 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 SERPINB5P36952 375 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 UGT2B15P54855 530 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 CDH12P55289 794 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 SLC35B1P78383 322 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 FMODQ06828 376 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 ENDOGQ14249 297 aaKnown RBP7.54□□□□□ -1.2
YBX3-211ENST00000541351 RPS26P11Q5JNZ5 115 aaPredicted RBP7.54□□□□□ -1.2
YBX3-211ENST00000541351 SPANXN4Q5MJ08 99 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 DHRS4L2Q6PKH6 230 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 FOXL2NBQ6ZUU3 175 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 PGAP1Q75T13 922 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 DHDDSQ86SQ9 333 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 GLB1L2Q8IW92 636 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 OR1F12Q8NHA8 337 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 MPP4Q96JB8 637 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 ATF6BQ99941 703 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 FAM107BQ9H098 131 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 POLE4Q9NR33 117 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 VNN3Q9NY84 501 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 STARD9Q9P2P6 4700 aa7.54□□□□□ -1.2
YBX3-211ENST00000541351 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 TMEM233B4DJY2 109 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 M0QZK8 103 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 M0R3H8 397 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 RFXANKO14593 260 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 PLIN3O60664 434 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 LPLP06858 475 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 GRPP07492 148 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 PGA5P0DJD9 388 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 CA6P23280 308 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 TGM4P49221 684 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 CEBPDP49716 269 aaPredicted RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 RAB13P51153 203 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 PRSS12P56730 875 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 SPIBQ01892 262 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 RPL18Q07020 188 aaKnown RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 IL18R1Q13478 541 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 MAPK11Q15759 364 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 ZNF260Q3ZCT1 412 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 ATPAF1Q5TC12 328 aaPredicted RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 C8orf74Q6P047 294 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 Q6ZS46 218 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 MRPL21Q7Z2W9 205 aaKnown RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 CHPT1Q8WUD6 406 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 NMD3Q96D46 503 aaKnown RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 RNFT2Q96EX2 444 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 OR52E6Q96RD3 313 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 ZBTB18Q99592 522 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 TXNIPQ9H3M7 391 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 CHCHD3Q9NX63 227 aaKnown RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 A4GNTQ9UNA3 340 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 RRP15Q9Y3B9 282 aaKnown RBP7.53□□□□□ -1.2
YBX3-211ENST00000541351 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
YBX3-211ENST00000541351 A6NIZ1 184 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 FAM90A8PA6NJQ4 464 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 SERPINB7O75635 380 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 FCN3O75636 299 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 TIPRLO75663 272 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 CTXN1P60606 82 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms