RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RNF128Q8TEB7 428 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 TCTEX1D2Q8WW35 142 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 FAM46BQ96A09 425 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 SEH1LQ96EE3 360 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 C4orf45Q96LM5 186 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 OR1F2PQ96R84 312 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 NMNAT3Q96T66 252 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 MAP3K3Q99759 626 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
CHFR-219ENST00000541341 SPRY4Q9C004 299 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 SLC7A5P2Q9GIP4 190 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
CHFR-219ENST00000541341 CHMP1AQ9HD42 196 aaPredicted RBP9.3□□□□□ -0.92
CHFR-219ENST00000541341 FANCFQ9NPI8 374 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 LUZP4Q9P127 313 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 HHLA2Q9UM44 414 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 SHANK1Q9Y566 2161 aa9.3□□□□□ -0.92
CHFR-219ENST00000541341 SPTBP11277 2137 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 TRAV14DV4A0A0A6YYC5 116 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 SERINC4A6NH21 518 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 PRKRAO75569 313 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 SIX6O95475 246 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 BPNT1O95861 308 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ABHD16AO95870 558 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 CBX7O95931 251 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 MAS1P04201 325 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ATXN8OSP0DMR3 200 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 LYL1P12980 280 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 FOSL1P15407 271 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 HPGDP15428 266 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ACHEP22303 614 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ZBTB25P24278 435 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 PTAFRP25105 342 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 DNASE1L1P49184 302 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 RAB5CP51148 216 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 CAV2P51636 162 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 F2RL1P55085 397 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 RPS18P62269 152 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 FHL1Q13642 323 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 KCNAB1Q14722 419 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 SURF2Q15527 256 aaPredicted RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 TRMT12Q53H54 448 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 LY6G6FQ5SQ64 297 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 C6orf15Q6UXA7 325 aaPredicted RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 VN1R4Q7Z5H5 301 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 PEG10Q86TG7 708 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR51D1Q8NGF3 324 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OTOSQ8NHW6 89 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 SFT2D1Q8WV19 159 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 PPP1R1CQ8WVI7 109 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 SLC41A2Q96JW4 573 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR5B2Q96R09 309 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR2A5Q96R48 311 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 OR8B4Q96RC9 309 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 EGLN1Q9GZT9 426 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 SYT4Q9H2B2 425 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ZNF768Q9H5H4 540 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 AKIRIN1Q9H9L7 192 aaPredicted RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 TREM1Q9NP99 234 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 UQCC1Q9NVA1 299 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ASF1BQ9NVP2 202 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 ANKRD10Q9NXR5 420 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 FLRT3Q9NZU0 649 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 LPAR3Q9UBY5 353 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 MRM2Q9UI43 246 aaKnown RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 TMEM184BQ9Y519 407 aaPredicted RBP9.29□□□□□ -0.92
CHFR-219ENST00000541341 CACNA1DQ01668 2161 aa9.29□□□□□ -0.92
CHFR-219ENST00000541341 FER1L5A0AVI2 2057 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PIGBOS1A0A0B4J2F0 54 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 IGHV5-51A0A0C4DH38 117 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 LOC390937A0A1W2PQ73 354 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 TMEM72A0PK05 275 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 A1L4Q6 167 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 C9orf170A2RU37 121 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 A6NIZ1 184 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 NPIPB9F8W1W9 429 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PEX12O00623 359 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 NUPL2O15504 423 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 LDB3O75112 727 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 JTBO76095 146 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 RPP14O95059 124 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 TIAF1O95411 115 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PLGP00747 810 aaPredicted RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 CRHP06850 196 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 OR8G3PP0DMU2 310 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ADRA2CP18825 462 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 GNLYP22749 145 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 MST1P26927 711 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 BDKRB2P30411 391 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 RPL35P42766 123 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 GABRA4P48169 554 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 NANOS3P60323 173 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 CTXN1P60606 82 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms