RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SOX7Q9BT81 388 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 C1QTNF5Q9BXJ0 243 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 PBOV1Q9GZY1 135 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 TRIM36Q9NQ86 728 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 OR52A1Q9UKL2 312 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 STARD10Q9Y365 291 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 KLF2Q9Y5W3 355 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 USP9YO00507 2555 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 HRNRQ86YZ3 2850 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 TRBV2A0A0J9YWF9 115 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 OR4C45A6NMZ5 311 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 DEFB108AA8MXU0 73 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ATP6V1G2-DDX39BF2Z307 99 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 P2RY10O00398 339 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ABCD4O14678 606 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 TBX1O43435 398 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 SMPD2O60906 423 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 PLAUP00749 431 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 TTRP02766 147 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 EPXP11678 715 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 CELP19835 753 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 PAX7P23759 505 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 PTAFRP25105 342 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 LOXP28300 417 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 LIPAP38571 399 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 MAGEB1P43366 347 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 TGM4P49221 684 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 UCP2P55851 309 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ERVS71-1P61550 626 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 SLC3A1Q07837 685 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 MLLT11Q13015 90 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 SSX1Q16384 188 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 GFOD2Q3B7J2 385 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 NCMAPQ5T1S8 102 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 SYT6Q5T7P8 510 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 BCL2L15Q5TBC7 163 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 LIPKQ5VXJ0 399 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 DMKNQ6E0U4 476 aaPredicted RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 RPL22L1Q6P5R6 122 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 ARL9Q6T311 187 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 TMEM108Q6UXF1 575 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 MEX3BQ6ZN04 569 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 COLCA1Q6ZS62 124 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ELMOD2Q8IZ81 293 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ACBD4Q8NC06 268 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 OR2AE1Q8NHA4 323 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ABHD4Q8TB40 342 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 RPS4Y2Q8TD47 263 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 FCGR1BQ92637 280 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 SGK3Q96BR1 496 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 PGAM5Q96HS1 289 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 RADILQ96JH8 1075 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 LYZL4Q96KX0 146 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 DCLRE1CQ96SD1 692 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 PDCD1LG2Q9BQ51 273 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 MOV10Q9HCE1 1003 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 ISYNA1Q9NPH2 558 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 NUFIP1Q9UHK0 495 aaKnown RBP8.05□□□□□ -1.12
DDX55-208ENST00000541259 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
DDX55-208ENST00000541259 ARFGEF3Q5TH69 2177 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 A0A1B0GTI1 187 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 ACOD1A6NK06 481 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 CASKO14936 926 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 PLPP2O43688 288 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 GPRIN2O60269 458 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 ZFPL1O95159 310 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 CRYAAP02489 173 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 APOC1P02654 83 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 CPEP16870 476 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 NR4A1P22736 598 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 PCSK6P29122 969 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 ALDH3B2P48448 385 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 CCR9P51686 369 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 RPS25P62851 125 aaKnown RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 BDH1Q02338 343 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 MRPL28Q13084 256 aaKnown RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 TPBGQ13641 420 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 HLXQ14774 488 aaPredicted RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 CCDC58Q4VC31 144 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 GLYATL3Q5SZD4 288 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 SPATA46Q5T0L3 261 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 SP5Q6BEB4 398 aaPredicted RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 SSX8Q7RTT4 187 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 PHC2Q8IXK0 858 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 OR1J1Q8NGS3 322 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 OR13C5Q8NGS8 318 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 OR10AC1Q8NH08 325 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 OR51E1Q8TCB6 317 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 FAM222BQ8WU58 562 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 RGP1Q92546 391 aaPredicted RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 GHSRQ92847 366 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 NEUROG1Q92886 237 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 UFD1Q92890 307 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 APOBEC3DQ96AK3 386 aaPredicted RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 PIK3IP1Q96FE7 263 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 ESRP2Q9H6T0 727 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms