RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 LPCAT3Q6P1A2 487 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 OR2W3Q7Z3T1 314 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DEFB123Q8N688 67 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 MEGF11A6BM72 1044 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 SLC25A4P12235 298 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ZBTB25P24278 435 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 CRABP1P29762 137 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 EIF1AXP47813 144 aaKnown RBP11.12□□□□□ -0.63
RNF4-222ENST00000541204 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
RNF4-222ENST00000541204 ZNF260Q3ZCT1 412 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 SLC25A42Q86VD7 318 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 TMEM185AQ8NFB2 350 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 CASTOR1Q8WTX7 329 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 AQP3Q92482 292 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 DNTTIP1Q9H147 329 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 MYOTQ9UBF9 498 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ADAMTS9Q9P2N4 1935 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ADAMTS20P59510 1910 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ARPC4-TTLL3A0A0A6YYG9 625 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 MS4A18H0YCH9 400 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 RAB27BO00194 218 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ZNF823P16415 610 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 IL32P24001 234 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 IL13RA1P78552 427 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 TLE3Q04726 772 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 MS4A18Q3C1V0 323 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 C1orf100Q5SVJ3 147 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
RNF4-222ENST00000541204 FGGYQ96C11 551 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 PRRT1Q99946 306 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 CENPMQ9NSP4 180 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 NPIPA1Q9UND3 350 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 RHBDD3Q9Y3P4 386 aa11.12□□□□□ -0.63
RNF4-222ENST00000541204 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 LOC390937A0A1W2PQ73 354 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 C9orf170A2RU37 121 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 A6NJ64 397 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 FTCDNL1E5RQL4 147 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 OR2T1O43869 369 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 EFNA2O43921 213 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 WDPCPO95876 746 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PNLIPP16233 465 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 VAMP1P23763 118 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 HRH1P35367 487 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 MEF2DQ14814 521 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF169Q14929 603 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF385CQ66K41 422 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 UNQ6126/PRO20091Q6UXV3 157 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 KCTD9Q7L273 389 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 RTN4RL2Q86UN3 420 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 TMEM17Q86X19 198 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 LYPD6Q86Y78 171 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 SLC26A10Q8NG04 563 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ST7LQ8TDW4 575 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 DEFB126Q9BYW3 111 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 EEF1E1-BLOC1S5C9J1V9 151 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZFAND5O76080 213 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 IGHMP01871 453 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ISG15P05161 165 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 GP1BAP07359 652 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 AKR1C4P17516 323 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 GNALP38405 381 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 CD96P40200 585 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 CASRP41180 1078 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF41P51814 821 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 UNC119Q13432 240 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 SNTB1Q13884 538 aaKnown RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 OR52N4Q8NGI2 321 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 A0A1W2PNR3 127 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 VSTM2BA6NLU5 285 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 F5H0A9 414 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 G3V3Y1 287 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 STK17BO94768 372 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ERCC1P07992 297 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 GNB3P16520 340 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 SFTPDP35247 375 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PRKXP51817 358 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PAN3Q58A45 887 aaKnown RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 TRIM61Q5EBN2 209 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF813Q6ZN06 617 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms