RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	LCN2	P80188	198 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	CDK5	Q00535	292 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	MALL	Q13021	153 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	MAB21L1	Q13394	359 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	TMEM155	Q4W5P6	130 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	PRAMEF6	Q5VXH4	476 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	TMEM236	Q5W0B7	351 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	PLBD1	Q6P4A8	553 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	SHQ1	Q6PI26	577 aa	Known RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	PGAP1	Q75T13	922 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	DPY19L4	Q7Z388	723 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	PEG10	Q86TG7	708 aa	Known RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	BBS1	Q8NFJ9	593 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	SPATA3	Q8NHX4	192 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	RNF133	Q8WVZ7	376 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	TMEM158	Q8WZ71	300 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	DVL3	Q92997	716 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	OTULIN	Q96BN8	352 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	ZMYND19	Q96E35	227 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	KCNJ15	Q99712	375 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	ABHD6	Q9BV23	337 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	OR51V1	Q9H2C8	321 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	METTL17	Q9H7H0	456 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	YY1AP1	Q9H869	796 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	PATZ1	Q9HBE1	687 aa	Known RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	SLC25A19	Q9HC21	320 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	TMEM100	Q9NV29	134 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	KLHDC2	Q9Y2U9	406 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	CEACAM18	A8MTB9	384 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF205	O95201	554 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	ANPEP	P15144	967 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	SLC2A5	P22732	501 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	MDH2	P40926	338 aa	Known RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	CD200	P41217	278 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	GATA4	P43694	442 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	CX3CR1	P49238	355 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	BLVRA	P53004	296 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	HOXA4	Q00056	320 aa	Predicted RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	FAM201A	Q5SY85	155 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	FAHD1	Q6P587	224 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	PRSS45	Q7RTY3	260 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	LRRC28	Q86X40	367 aa	Predicted RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	SPIC	Q8N5J4	248 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	OR56B2P	Q8NGI1	322 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	FAHD2A	Q96GK7	314 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	ADAT1	Q9BUB4	502 aa	Known RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	REPIN1	Q9BWE0	567 aa	Known RBP	11.45	□□□□□ -0.58
POLE-215	ENST00000540987	OPN4	Q9UHM6	478 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987	WNK2	Q9Y3S1	2297 aa		11.45	□□□□□ -0.58
POLE-215	ENST00000540987		A0A0G2JMP0	313 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987		A0A0X1KG70	313 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987		A8MXK9	166 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	PRR23D1	E9PI22	279 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-215	ENST00000540987	IFNL4	K9M1U5	179 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-215	ENST00000540987	ADRA2C	P18825	462 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	PAICS	P22234	425 aa	Known RBP	11.44	□□□□□ -0.58
POLE-215	ENST00000540987	CA6	P23280	308 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	OPRL1	P41146	370 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	DAP	P51397	102 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	GRB2	P62993	217 aa	Known RBP	11.44	□□□□□ -0.58
POLE-215	ENST00000540987	TAF13	Q15543	124 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF181	Q2M3W8	571 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	DCAF12L2	Q5VW00	463 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	C1QL2	Q7Z5L3	287 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	CPO	Q8IVL8	374 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	OR4M2	Q8NGB6	313 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-215	ENST00000540987	SPSB4	Q96A44	273 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF556	Q9HAH1	456 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	N6AMT1	Q9Y5N5	214 aa		11.44	□□□□□ -0.58
POLE-215	ENST00000540987	CCDC182	A6NF36	153 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	GGT3P	A6NGU5	568 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987		J3QLI3	93 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987		M0R129	80 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	PRODH	O43272	600 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	TBX1	O43435	398 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	MITF	O75030	526 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-215	ENST00000540987	FAM20B	O75063	409 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	FSHB	P01225	129 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	NAA10	P41227	235 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-215	ENST00000540987	OR8G1	Q15617	311 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	MPPED2	Q15777	294 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	ATP6AP1	Q15904	470 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	KLHL12	Q53G59	568 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	SHF	Q7M4L6	423 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	MUC20	Q8N307	709 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-215	ENST00000540987	RFLNB	Q8N5W9	214 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	CELF2-AS1	Q8N7Q2	184 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	DEFB108B	Q8NET1	73 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	OR5K1	Q8NHB7	308 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987		Q8TCH9	128 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	NRBF2	Q96F24	287 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	C19orf24	Q9BVV8	132 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	MMP26	Q9NRE1	261 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.43	□□□□□ -0.58
POLE-215	ENST00000540987	DNAJC27	Q9NZQ0	273 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	KIF17	Q9P2E2	1029 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF319	Q9P2F9	582 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms