RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 M0R233 179 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 SLC1A7O00341 560 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 MTRF1O75570 445 aaKnown RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 NGFP01138 241 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 PSKH1P11801 424 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 ZNF12P17014 697 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 KITLGP21583 273 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 HCCSP53701 268 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 ZNF121P58317 390 aaPredicted RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 SMN1Q16637 294 aaKnown RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 TIGD6Q17RP2 521 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 SWI5Q1ZZU3 235 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 ZNF684Q5T5D7 378 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 RFPL4BQ6ZWI9 263 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 SPATC1Q76KD6 591 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 MRPL21Q7Z2W9 205 aaKnown RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 KLHL36Q8N4N3 616 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 GGHQ92820 318 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 SPSB4Q96A44 273 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 AMELYQ99218 206 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 TBX5Q99593 518 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 ALG8Q9BVK2 526 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 BARX1Q9HBU1 254 aaPredicted RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 ERVK13-1Q9NX77 482 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 AASSQ9UDR5 926 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 NUFIP1Q9UHK0 495 aaKnown RBP15.05■□□□□ -0
CLSTN3-210ENST00000540931 DUSP13Q9UII6 198 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 LAMP3Q9UQV4 416 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 ERGIC3Q9Y282 383 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 KLHDC2Q9Y2U9 406 aa15.05■□□□□ -0
CLSTN3-210ENST00000540931 A0A1W2PPR1 153 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 A0A1W2PPW3 197 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 H7C417 338 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 GPRIN2O60269 458 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 PAX1P15863 534 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 CCR9P51686 369 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 GBX2P52951 348 aaPredicted RBP15.04■□□□□ -0
CLSTN3-210ENST00000540931 TAS2R43P59537 309 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 ZNF85Q03923 595 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 MZT1Q08AG7 82 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 NKPD1Q17RQ9 610 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 PCGF3Q3KNV8 242 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 CCDC58Q4VC31 144 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 LIPNQ5VXI9 398 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 FDX2Q6P4F2 183 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 KLBQ86Z14 1044 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 LRRC75A-AS1Q8N1F1 130 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 CSNK2A3Q8NEV1 391 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 OR52N1Q8NH53 320 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 REPIN1Q9BWE0 567 aaKnown RBP15.04■□□□□ -0
CLSTN3-210ENST00000540931 RAB1BQ9H0U4 201 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 ABCB9Q9NP78 766 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 DYNLRB1Q9NP97 96 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 MRM2Q9UI43 246 aaKnown RBP15.04■□□□□ -0
CLSTN3-210ENST00000540931 GNG8Q9UK08 70 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 ZDHHC8Q9ULC8 765 aa15.04■□□□□ -0
CLSTN3-210ENST00000540931 PLCE1Q9P212 2302 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 TMEM129A0AVI4 362 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 MYL12BO14950 172 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 TBX1O43435 398 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 TIMM8AO60220 97 aaPredicted RBP15.03■□□□□ -0
CLSTN3-210ENST00000540931 APOL3O95236 402 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 BCL2L15Q5TBC7 163 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 FAM57BQ71RH2 274 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 PRSS45Q7RTY3 260 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 NEUROG1Q92886 237 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 CMBLQ96DG6 245 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 MRPL37Q9BZE1 423 aaKnown RBP15.03■□□□□ -0
CLSTN3-210ENST00000540931 OR51B6Q9H340 312 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 FKBP14Q9NWM8 211 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 FAM206AQ9NX38 181 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 MYRFQ9Y2G1 1151 aa15.03■□□□□ -0
CLSTN3-210ENST00000540931 LOC390937A0A1W2PQ73 354 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 DHRS7CA6NNS2 312 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 OVOL3O00110 214 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 HTR1AP08908 422 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 UBCP0CG48 685 aaKnown RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 CD53P19397 219 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 TNFSF4P23510 183 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 TGM4P49221 684 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 GABARAPL2P60520 117 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 GK2Q14410 553 aaPredicted RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 TESK1Q15569 626 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 ZBTB37Q5TC79 503 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 AHSA2Q719I0 299 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 CDH24Q86UP0 819 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 LHFPL3Q86UP9 236 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 ELMOD2Q8IZ81 293 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 SPERTQ8NA61 448 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 SPRYD4Q8WW59 207 aaPredicted RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 NEU4Q8WWR8 484 aaPredicted RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 C4orf36Q96KX1 117 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 CDCA4Q9BXL8 241 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 PBOV1Q9GZY1 135 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 DUSP21Q9H596 190 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 MYOZ1Q9NP98 299 aaPredicted RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 NKIRAS2Q9NYR9 191 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 PURGQ9UJV8 347 aaKnown RBP15.02■□□□□ -0
CLSTN3-210ENST00000540931 OR52A1Q9UKL2 312 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 ITGB1BP2Q9UKP3 347 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms