RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 UBL3O95164 117 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 CST2P09228 141 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 GLI4P10075 376 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 CD37P11049 281 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-204ENST00000540846 TIMP3P35625 211 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 KIR2DL2P43627 348 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-204ENST00000540846 RFX2P48378 723 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 CX3CR1P49238 355 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF121P58317 390 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-204ENST00000540846 FOXF2Q12947 444 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 SF3B4Q15427 424 aaKnown RBP eCLIP10.91□□□□□ -0.666e-6■□□□□ 11
SMAD3-204ENST00000540846 TAB1Q15750 504 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 LINGO2Q7L985 606 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 PRSS45Q7RTY3 260 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 TRIM63Q969Q1 353 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 PPP1R14BQ96C90 147 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 DMRTA2Q96SC8 542 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 GLRX2Q9NS18 164 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 TAS2R4Q9NYW5 299 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 STEAP1Q9UHE8 339 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 NOSIPQ9Y314 301 aaKnown RBP10.91□□□□□ -0.66
SMAD3-204ENST00000540846 HIVEP3Q5T1R4 2406 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 A0A1B0GTI1 187 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 SLC17A2O00624 439 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 SSX4O60224 188 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 PRB1P04280 392 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 PRKXP51817 358 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 CLDN12P56749 244 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 RBPJQ06330 500 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 STK11Q15831 433 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 CCDC92Q53HC0 331 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-204ENST00000540846 ELFN2Q5R3F8 820 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 OR2A2Q6IF42 318 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 FAM166AQ6J272 317 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 CCBE1Q6UXH8 406 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-204ENST00000540846 FAM214BQ7L5A3 538 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.9□□□□□ -0.66
SMAD3-204ENST00000540846 P4HA3Q7Z4N8 544 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 NRARPQ7Z6K4 114 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 CMTM4Q8IZR5 234 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 OR8B12Q8NGG6 310 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 RAB40AQ8WXH6 277 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 SLC22A4Q9H015 551 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 ABCG5Q9H222 651 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 SLCO5A1Q9H2Y9 848 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 GPR35Q9HC97 309 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF275Q9NSD4 429 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-204ENST00000540846 FAM208BQ5VWN6 2430 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 PCNX1Q96RV3 2341 aa10.9□□□□□ -0.66
SMAD3-204ENST00000540846 A0A1B0GVI7 797 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 MEGF11A6BM72 1044 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 PLA2G10O15496 165 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 SYT7O43581 403 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 DOK2O60496 412 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 LMX1BO60663 402 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 CCL1P22362 96 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 CA7P43166 264 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 PITPNAQ00169 270 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 MRPL49Q13405 166 aaKnown RBP10.9□□□□□ -0.67
SMAD3-204ENST00000540846 RAB35Q15286 201 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 NRN1LQ496H8 165 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 TSPO2Q5TGU0 170 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 NCCRP1Q6ZVX7 275 aaPredicted RBP10.9□□□□□ -0.67
SMAD3-204ENST00000540846 MCEMP1Q8IX19 187 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 LRRC18Q8N456 261 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF283Q8N7M2 679 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 NKAIN3Q8N8D7 197 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 ZFP3Q96NJ6 502 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 ABHD1Q96SE0 405 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 FOXB1Q99853 325 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 HDHD2Q9H0R4 259 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 C11orf54Q9H0W9 315 aaPredicted RBP10.9□□□□□ -0.67
SMAD3-204ENST00000540846 SLC7A10Q9NS82 523 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 PARPBPQ9NWS1 579 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 SLC5A6Q9Y289 635 aa10.9□□□□□ -0.67
SMAD3-204ENST00000540846 LOC390937A0A1W2PQ73 354 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 A6NIN4 97 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 CTDSPLO15194 276 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 MRPL33O75394 65 aaKnown RBP10.89□□□□□ -0.67
SMAD3-204ENST00000540846 CGAP01215 116 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 APOC1P02654 83 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 CRHP06850 196 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 OR3A2P47893 321 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 RAB11BQ15907 218 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 HACD4Q5VWC8 232 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 GLT8D1Q68CQ7 371 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 VWA1Q6PCB0 445 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 TFAP2EQ6VUC0 442 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF843Q8N446 348 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 C19orf18Q8NEA5 215 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 OR51E1Q8TCB6 317 aa10.89□□□□□ -0.67
SMAD3-204ENST00000540846 RFT1Q96AA3 541 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms