RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CD1AP06126 327 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 MMP7P09237 267 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SELEP16581 610 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC2A5P22732 501 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CHATP28329 748 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TEAD1P28347 426 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 RPL29P47914 159 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 UCP2P55851 309 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SSBP1Q04837 148 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 RIPPLY2Q5TAB7 128 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM268Q5VZI3 342 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 OR52L1Q8NGH7 329 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC6A7Q99884 636 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SYT3Q9BQG1 590 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CMC2Q9NRP2 79 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 GRHPRQ9UBQ7 328 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 V9GYS6 101 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A087WV62 115 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 EIF1AYO14602 144 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 GEMIN2O14893 280 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PLRG1O43660 514 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 THY1P04216 161 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PGA4P0DJD7 388 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PGA5P0DJD9 388 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 CSRP1P21291 193 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 CD82P27701 267 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 AKT2P31751 481 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTA2P62736 377 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTG2P63267 376 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PAX5Q02548 391 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 SYS1Q8N2H4 156 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF563Q8TA94 476 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 FAM131CQ96AQ9 280 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ARSGQ96EG1 525 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF587Q96SQ5 575 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 MENTQ9BUN1 341 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 GON4LQ3T8J9 2241 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A087WV48 116 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 UNC119BA6NIH7 251 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PDGFBP01127 241 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 MBPP02686 304 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 IRF2P14316 349 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 PNLIPP16233 465 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 TACR3P29371 465 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 CEACAM8P31997 349 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 FOXK1P85037 733 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 OR5I1Q13606 314 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 CRMP1Q14194 572 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 SOHLH1Q5JUK2 328 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 WDR88Q6ZMY6 472 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 NRSN1Q8IZ57 195 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 OR9K2Q8NGE7 335 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 TAAR8Q969N4 342 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 NUS1Q96E22 293 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 DPH1Q9BZG8 443 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 C5AR2Q9P296 337 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 TMED7Q9Y3B3 224 aa8.48□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A1W2PQU0 124 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 DHRS7CA6NNS2 312 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC16A5O15375 505 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 P2RX6O15547 441 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CSTBP04080 98 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TK1P04183 234 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 MPC1LP0DKB6 136 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 LYL1P12980 280 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF28P17035 718 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 BRS3P32247 399 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CX3CR1P49238 355 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZXDAP98168 799 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CYCSP99999 105 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 B4GALNT1Q00973 533 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF616Q08AN1 781 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 EIF2B1Q14232 305 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ELOCQ15369 112 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 AGTRAPQ6RW13 159 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GDF7Q7Z4P5 450 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 Q8NFD4 153 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TSTD1Q8NFU3 115 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR51D1Q8NGF3 324 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR4C6Q8NH72 309 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC2A12Q8TD20 617 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 EXTL1Q92935 676 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 RAB39BQ96DA2 213 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SEH1LQ96EE3 360 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC35G5Q96KT7 338 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 KCNK15Q9H427 330 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CAPN10Q9HC96 672 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms