RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 GLRX2Q9NS18 164 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 FAM206AQ9NX38 181 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ING4Q9UNL4 249 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SLC22A13Q9Y226 551 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 IGSF10Q6WRI0 2623 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CACNA1GO43497 2377 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 A0A0G2JK05 382 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SMIM30A4D0T7 59 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 I3L521 148 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ORC5O43913 435 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 KRT33AO76009 404 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 NCR1O76036 304 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 PER3P56645 1201 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 PPP3R1P63098 170 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CEACAM16Q2WEN9 425 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CLLU1Q5K131 121 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 TSPO2Q5TGU0 170 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SFXN4Q6P4A7 337 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 UTS2BQ765I0 119 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 LINGO2Q7L985 606 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SYT9Q86SS6 491 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 NR2C2APQ86WQ0 139 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 RBMXL3Q8N7X1 1067 aaKnown RBP14.84□□□□□ -0.03
COPS3-212ENST00000539941 DUSP18Q8NEJ0 188 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 OR8H1Q8NGG4 311 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CCDC120Q96HB5 630 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 TAAR6Q96RI8 345 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 RANBP3Q9H6Z4 567 aaPredicted RBP14.84□□□□□ -0.03
COPS3-212ENST00000539941 CALHM2Q9HA72 323 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 HHLA2Q9UM44 414 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SMG1Q96Q15 3661 aaKnown RBP14.83□□□□□ -0.04
COPS3-212ENST00000539941 A0A1W2PPK0 400 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 OR14I1A6ND48 311 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 IFNA7P01567 189 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 UCNP55089 124 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 SCRN3Q0VDG4 424 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 TMEM65Q6PI78 240 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 TSEN15Q8WW01 171 aaKnown RBP14.83□□□□□ -0.04
COPS3-212ENST00000539941 APH1AQ96BI3 265 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 KCNJ15Q99712 375 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 CLCF1Q9UBD9 225 aa14.83□□□□□ -0.04
COPS3-212ENST00000539941 NCOA6Q14686 2063 aaPredicted RBP14.83□□□□□ -0.04
COPS3-212ENST00000539941 ZNF587BE7ETH6 402 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 SNAPC5O75971 98 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 HLA-DQB1P01920 261 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 CRYABP02511 175 aaKnown RBP14.82□□□□□ -0.04
COPS3-212ENST00000539941 APOC1P02654 83 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 CD2P06729 351 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 PCBD1P61457 104 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 RRAS2P62070 204 aaPredicted RBP14.82□□□□□ -0.04
COPS3-212ENST00000539941 ELFN2Q5R3F8 820 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 SHEQ5VZ18 495 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 ZNF627Q7L945 461 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 SLC22A24Q8N4F4 322 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 OR4M2Q8NGB6 313 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 OR10AC1Q8NH08 325 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 TMEM106AQ96A25 262 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 GMPPAQ96IJ6 420 aaPredicted RBP14.82□□□□□ -0.04
COPS3-212ENST00000539941 PBOV1Q9GZY1 135 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 HDHD2Q9H0R4 259 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 MMP28Q9H239 520 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 PRORYQ9H606 182 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 TCF7L1Q9HCS4 588 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 ABCB9Q9NP78 766 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 SLC7A10Q9NS82 523 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 ADAM30Q9UKF2 790 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 DHDHQ9UQ10 334 aa14.82□□□□□ -0.04
COPS3-212ENST00000539941 FARS2O95363 451 aaKnown RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 TGM6O95932 706 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 APEX1P27695 318 aaKnown RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 MAP2K3P46734 347 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 SOX2P48431 317 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 OR10A3P58181 314 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 RAB14P61106 215 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ECH1Q13011 328 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 RAB35Q15286 201 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ODF4Q2M2E3 257 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 IDNKQ5T6J7 187 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 LAMTOR1Q6IAA8 161 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 TEX261Q6UWH6 196 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 P4HA3Q7Z4N8 544 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ABHD12BQ7Z5M8 362 aaPredicted RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 LAX1Q8IWV1 398 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 ZNF100Q8IYN0 542 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 LRRC18Q8N456 261 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 C9orf62Q8N4C0 152 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 OR51A4Q8NGJ6 313 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 FBXO17Q96EF6 278 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 C11orf54Q9H0W9 315 aaPredicted RBP14.81□□□□□ -0.04
COPS3-212ENST00000539941 MIXL1Q9H2W2 232 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 IFT22Q9H7X7 185 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 CLEC4AQ9UMR7 237 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 U3KQ87 197 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 MGAQ8IWI9 3026 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 PTPRQQ9UMZ3 2332 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 LOC107986453A0A1B0GWG9 222 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 TPOP07202 933 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 EPXP11678 715 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 B4GALT1P15291 398 aa14.81□□□□□ -0.04
COPS3-212ENST00000539941 AGTR1P30556 359 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms