RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FBLN5Q9UBX5 448 aa15.05■□□□□ -0
LTBR-207ENST00000539925 CACNG2Q9Y698 323 aa15.05■□□□□ -0
LTBR-207ENST00000539925 NAP1L6A6NFF2 107 aa15.04■□□□□ -0
LTBR-207ENST00000539925 BPNT1O95861 308 aa15.04■□□□□ -0
LTBR-207ENST00000539925 COX5BP10606 129 aa15.04■□□□□ -0
LTBR-207ENST00000539925 GABRA1P14867 456 aa15.04■□□□□ -0
LTBR-207ENST00000539925 CDK2P24941 298 aa15.04■□□□□ -0
LTBR-207ENST00000539925 SSBP1Q04837 148 aaKnown RBP15.04■□□□□ -0
LTBR-207ENST00000539925 SPOCK1Q08629 439 aa15.04■□□□□ -0
LTBR-207ENST00000539925 MADCAM1Q13477 382 aa15.04■□□□□ -0
LTBR-207ENST00000539925 FGD2Q7Z6J4 655 aa15.04■□□□□ -0
LTBR-207ENST00000539925 CDH24Q86UP0 819 aa15.04■□□□□ -0
LTBR-207ENST00000539925 LYPD6Q86Y78 171 aa15.04■□□□□ -0
LTBR-207ENST00000539925 OR14K1Q8NGZ2 314 aa15.04■□□□□ -0
LTBR-207ENST00000539925 SNRNP27Q8WVK2 155 aaKnown RBP15.04■□□□□ -0
LTBR-207ENST00000539925 SARAFQ96BY9 339 aa15.04■□□□□ -0
LTBR-207ENST00000539925 ADAT3Q96EY9 351 aaPredicted RBP15.04■□□□□ -0
LTBR-207ENST00000539925 NEURL2Q9BR09 285 aa15.04■□□□□ -0
LTBR-207ENST00000539925 RNF121Q9H920 327 aa15.04■□□□□ -0
LTBR-207ENST00000539925 SLC7A10Q9NS82 523 aa15.04■□□□□ -0
LTBR-207ENST00000539925 TAS2R8Q9NYW2 309 aa15.04■□□□□ -0
LTBR-207ENST00000539925 LIPGQ9Y5X9 500 aa15.04■□□□□ -0
LTBR-207ENST00000539925 V9GYS6 101 aa15.04■□□□□ -0
LTBR-207ENST00000539925 FAM186AA6NE01 2351 aa15.03■□□□□ -0
LTBR-207ENST00000539925 DCDC2BA2VCK2 349 aa15.03■□□□□ -0
LTBR-207ENST00000539925 METTL21EPA6NDL7 271 aa15.03■□□□□ -0
LTBR-207ENST00000539925 TRAPPC2P0DI81 140 aa15.03■□□□□ -0
LTBR-207ENST00000539925 TRAPPC2BP0DI82 140 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SLC2A1P11166 492 aa15.03■□□□□ -0
LTBR-207ENST00000539925 ZNF32P17041 273 aa15.03■□□□□ -0
LTBR-207ENST00000539925 PTH2RP49190 550 aa15.03■□□□□ -0
LTBR-207ENST00000539925 TAS2R20P59543 309 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SF3B4Q15427 424 aaKnown RBP eCLIP15.03■□□□□ -01e-8■■■■■ 29.1
LTBR-207ENST00000539925 RNFT1Q5M7Z0 435 aa15.03■□□□□ -0
LTBR-207ENST00000539925 UTS2BQ765I0 119 aa15.03■□□□□ -0
LTBR-207ENST00000539925 CPNE2Q96FN4 548 aaPredicted RBP15.03■□□□□ -0
LTBR-207ENST00000539925 GMPPAQ96IJ6 420 aaPredicted RBP15.03■□□□□ -0
LTBR-207ENST00000539925 RAB22AQ9UL26 194 aa15.03■□□□□ -0
LTBR-207ENST00000539925 PHF3Q92576 2039 aaKnown RBP15.03■□□□□ -0
LTBR-207ENST00000539925 GGT3PA6NGU5 568 aa15.03■□□□□ -0
LTBR-207ENST00000539925 A6NIN4 97 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SULT1C2O00338 296 aa15.03■□□□□ -0
LTBR-207ENST00000539925 ORC5O43913 435 aa15.03■□□□□ -0
LTBR-207ENST00000539925 CTAG2O75638 210 aa15.03■□□□□ -0
LTBR-207ENST00000539925 UBBP0CG47 229 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SLC6A1P30531 599 aa15.03■□□□□ -0
LTBR-207ENST00000539925 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
LTBR-207ENST00000539925 HTR5AP47898 357 aa15.03■□□□□ -0
LTBR-207ENST00000539925 DGCR2P98153 550 aa15.03■□□□□ -0
LTBR-207ENST00000539925 AGAP6Q5VW22 663 aa15.03■□□□□ -0
LTBR-207ENST00000539925 DNM1P46Q6ZS02 220 aa15.03■□□□□ -0
LTBR-207ENST00000539925 KRT74Q7RTS7 529 aa15.03■□□□□ -0
LTBR-207ENST00000539925 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.03■□□□□ -0
LTBR-207ENST00000539925 OR51A2Q8NGJ7 313 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SNIP1Q8TAD8 396 aaKnown RBP15.03■□□□□ -0
LTBR-207ENST00000539925 CREB3L1Q96BA8 519 aa15.03■□□□□ -0
LTBR-207ENST00000539925 FAM71F1Q96KD3 344 aaPredicted RBP15.03■□□□□ -0
LTBR-207ENST00000539925 NEDD4LQ96PU5 975 aa15.03■□□□□ -0
LTBR-207ENST00000539925 SPRR3Q9UBC9 169 aa15.03■□□□□ -0
LTBR-207ENST00000539925 GHRLQ9UBU3 117 aa15.03■□□□□ -0
LTBR-207ENST00000539925 RBMX2Q9Y388 322 aaKnown RBP15.03■□□□□ -0
LTBR-207ENST00000539925 N6AMT1Q9Y5N5 214 aa15.03■□□□□ -0
LTBR-207ENST00000539925 NCOA6Q14686 2063 aaPredicted RBP15.02■□□□□ -0
LTBR-207ENST00000539925 GVINP1Q7Z2Y8 2422 aa15.02■□□□□ -0
LTBR-207ENST00000539925 TMEM272A0A1B0GTI8 110 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 LDLRAD4O15165 306 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 ARR3P36575 388 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 GDNFP39905 211 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 KIR2DL3P43628 341 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 ARF1P84077 181 aaKnown RBP15.02□□□□□ -0.01
LTBR-207ENST00000539925 PSG4Q00888 419 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 GPR176Q14439 515 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 ZNF169Q14929 603 aaPredicted RBP15.02□□□□□ -0.01
LTBR-207ENST00000539925 RSPO1Q2MKA7 263 aaPredicted RBP15.02□□□□□ -0.01
LTBR-207ENST00000539925 OR2W3Q7Z3T1 314 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 P4HA3Q7Z4N8 544 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 OR13C9Q8NGT0 318 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 NUDT16L1Q9BRJ7 211 aaKnown RBP15.02□□□□□ -0.01
LTBR-207ENST00000539925 DPAGT1Q9H3H5 408 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 ZNF319Q9P2F9 582 aa15.02□□□□□ -0.01
LTBR-207ENST00000539925 EFSO43281 561 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 SSX4O60224 188 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 ADRB1P08588 477 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 MMP7P09237 267 aaPredicted RBP15.01□□□□□ -0.01
LTBR-207ENST00000539925 CD3GP09693 182 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 FAM157BP0CG42 384 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 PRF1P14222 555 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 ZNF93P35789 620 aaPredicted RBP15.01□□□□□ -0.01
LTBR-207ENST00000539925 GSK3AP49840 483 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 BTG1P62324 171 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 ZNF774Q6NX45 483 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 SKA3Q8IX90 412 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 CELF2-AS1Q8N7Q2 184 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 PNLDC1Q8NA58 520 aaKnown RBP15.01□□□□□ -0.01
LTBR-207ENST00000539925 NANOS1Q8WY41 292 aaKnown RBP15.01□□□□□ -0.01
LTBR-207ENST00000539925 AKAP1Q92667 903 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■■□□ 18.3
LTBR-207ENST00000539925 MARVELD1Q9BSK0 173 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 WNT5BQ9H1J7 359 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 SCPEP1Q9HB40 452 aa15.01□□□□□ -0.01
LTBR-207ENST00000539925 CGGBP1Q9UFW8 167 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms