RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 UNKLQ9H9P5 680 aaKnown RBP12.62□□□□□ -0.39
USB1-203ENST00000539737 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 USE1Q9NZ43 259 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ZNF69Q9UC07 566 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ISPDA4D126 451 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 ZAR1LA6NP61 321 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 CLDN25C9JDP6 229 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 SPRY3O43610 288 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 GLCEO94923 617 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 SPARCP09486 303 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 HKR1P10072 659 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 CLUP10909 449 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 OMGP23515 440 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 MPV17P39210 176 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 WNT5AP41221 380 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 RGS6P49758 472 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 SLC3A1Q07837 685 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 DBPQ10586 325 aaPredicted RBP12.61□□□□□ -0.39
USB1-203ENST00000539737 HFEQ30201 348 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
USB1-203ENST00000539737 TEX30Q5JUR7 227 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 SLC35D3Q5M8T2 416 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 TMEM236Q5W0B7 351 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 CFAP77Q6ZQR2 320 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 RFPL4BQ6ZWI9 263 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 ABHD4Q8TB40 342 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 RAB39BQ96DA2 213 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 C4orf45Q96LM5 186 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 JMJD8Q96S16 334 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 INTS14Q96SY0 518 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 PITX2Q99697 317 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 ATF6BQ99941 703 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 C9orf16Q9BUW7 83 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 HCAR1Q9BXC0 346 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 OR51V1Q9H2C8 321 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 RIBC2Q9H4K1 309 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 MED20Q9H944 212 aa12.61□□□□□ -0.39
USB1-203ENST00000539737 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
USB1-203ENST00000539737 CGGBP1Q9UFW8 167 aaPredicted RBP12.61□□□□□ -0.39
USB1-203ENST00000539737 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 EI24O14681 340 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ALPLP05186 524 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 TUBG1P23258 451 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 GSTT1P30711 240 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 CRYBB2P43320 205 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ALDH3A2P51648 485 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 RAD23AP54725 363 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
USB1-203ENST00000539737 PCK2Q16822 640 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 KLHL12Q53G59 568 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 LINC01590Q5TEZ4 76 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 LCN1P1Q5VSP4 162 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 C12orf73Q69YU5 71 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 LYPD4Q6UWN0 246 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 CPOQ8IVL8 374 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ZNF101Q8IZC7 436 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 NANPQ8TBE9 248 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ZNRF4Q8WWF5 429 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 CCL17Q92583 94 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 RAB1CQ92928 201 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 PTP4A1Q93096 173 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 DIRC2Q96SL1 478 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 GAL3ST1Q99999 423 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 WDR76Q9H967 626 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 TUBG2Q9NRH3 451 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 TBCCD1Q9NVR7 557 aa12.6□□□□□ -0.39
USB1-203ENST00000539737 ZSCAN5BA6NJL1 495 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 ZNF593O00488 134 aaPredicted RBP12.59□□□□□ -0.39
USB1-203ENST00000539737 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 TNFSF4P23510 183 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 PPP1CBP62140 327 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 MBNL2Q5VZF2 373 aaKnown RBP12.59□□□□□ -0.39
USB1-203ENST00000539737 SHFQ7M4L6 423 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 ERI1Q8IV48 349 aaKnown RBP12.59□□□□□ -0.39
USB1-203ENST00000539737 CBR4Q8N4T8 237 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 SPTSSAQ969W0 71 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 MARCH7Q9H992 704 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 PNRC2Q9NPJ4 139 aaKnown RBP12.59□□□□□ -0.39
USB1-203ENST00000539737 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
USB1-203ENST00000539737 ZNF878C9JN71 531 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 PRKYO43930 277 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.4
USB1-203ENST00000539737 BAG2O95816 211 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 MDKP21741 143 aaPredicted RBP12.58□□□□□ -0.4
USB1-203ENST00000539737 SLC2A5P22732 501 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 EPHA2P29317 976 aa12.58□□□□□ -0.4
USB1-203ENST00000539737 RPS27P42677 84 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms