RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 RAB27BO00194 218 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ALOX12BO75342 701 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 SCGNO76038 276 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 S100A6P06703 90 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 MPGP29372 298 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CCL7P80098 99 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF260Q3ZCT1 412 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 RHBDD2Q6NTF9 364 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 PAPD4Q6PIY7 484 aaKnown RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OR5M9Q8NGP3 310 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 NPAS1Q99742 590 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 PPA2Q9H2U2 334 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CENPMQ9NSP4 180 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 FAM206AQ9NX38 181 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 KLHL13Q9P2N7 655 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CFAP47Q6ZTR5 3102 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 A0A0D9SG52 128 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 A0A1W2PQM1 296 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 LIPT2A6NK58 231 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 A8MXK9 166 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 BPNT1O95861 308 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 BTF3P20290 206 aaKnown RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 GSK3AP49840 483 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OR10K2Q6IF99 312 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OVCH2Q7RTZ1 564 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ANKRD37Q7Z713 158 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 TMED4Q7Z7H5 227 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 BEST3Q8N1M1 668 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 STEAP2Q8NFT2 490 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OR10H5Q8NGA6 315 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 OR13C8Q8NGS7 320 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 RNF138Q8WVD3 245 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 RELTQ969Z4 430 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 FAM46BQ96A09 425 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 FGGYQ96C11 551 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CXorf58Q96LI9 332 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 C5orf34Q96MH7 638 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 SLC6A7Q99884 636 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 GAL3ST1Q99999 423 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 NUDT16L1Q9BRJ7 211 aaKnown RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CNTD2Q9H8S5 307 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 MED29Q9NX70 200 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 CYB5R1Q9UHQ9 305 aa12.92□□□□□ -0.34
CDCA3-207ENST00000538862 ATXN7L1Q9ULK2 861 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 RPH3AQ9Y2J0 694 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-207ENST00000538862 TRAV14DV4A0A0A6YYC5 116 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 A0A1W2PNV4 684 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 TMEM235A6NFC5 223 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 TOX3O15405 576 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 LMX1BO60663 402 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF354AO60765 605 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 TTRP02766 147 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF28P17035 718 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 HLA-GP17693 338 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 MSX1P28360 303 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 NUP62P37198 522 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 DHRS2Q13268 280 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 STK11Q15831 433 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 ARSKQ6UWY0 536 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 SHISA6Q6ZSJ9 500 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 PDZD9Q8IXQ8 264 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 SLC22A24Q8N4F4 322 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 PAQR4Q8N4S7 273 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 EIF4E3Q8N5X7 224 aaKnown RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 ACBD4Q8NC06 268 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 OR1J2Q8NGS2 313 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 C11orf40Q8WZ69 217 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 ZMAT3Q9HA38 289 aaKnown RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 MYEF2Q9P2K5 600 aaKnown RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 FBLN5Q9UBX5 448 aa12.91□□□□□ -0.34
CDCA3-207ENST00000538862 GPN3Q9UHW5 284 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
CDCA3-207ENST00000538862 PMS2P1A4D2B8 440 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SYT7O43581 403 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 FGF2P09038 288 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SLC25A4P12235 298 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 MGMTP16455 207 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 CD34P28906 385 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 QRFPP83859 136 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SQSTM1Q13501 440 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SCGB2B2Q4G0G5 96 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
CDCA3-207ENST00000538862 THEM4Q5T1C6 240 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 LIN54Q6MZP7 749 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms