RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 LCATP04180 440 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 GYPBP06028 91 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 NAA10P41227 235 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 MAPK8P45983 427 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 S100A10P60903 97 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 IL15RAQ13261 267 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 OR10G4Q8NGN3 311 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 RNF128Q8TEB7 428 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 LMF1Q96S06 567 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 AURKAIP1Q9NWT8 199 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 KLK13Q9UKR3 277 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 RPH3ALQ9UNE2 315 aa11.14□□□□□ -0.63
USP3-203ENST00000538686 ZFP37Q9Y6Q3 630 aaPredicted RBP11.14□□□□□ -0.63
USP3-203ENST00000538686 A6NJY4 79 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 SOCS5O75159 536 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 PCCBP05166 539 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 CSN2P05814 226 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 SRP19P09132 144 aaKnown RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 GIMD1P0DJR0 217 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TMEM225BP0DP42 221 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TDGF1P13385 188 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 P2RY1P47900 373 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 SOX2P48431 317 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TMEM33P57088 247 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 GRINAQ7Z429 371 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TGIF2LYQ8IUE0 185 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 PTX4Q96A99 478 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 MRGPRFQ96AM1 343 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 ADAD1Q96M93 576 aaKnown RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 PRSS27Q9BQR3 290 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 CSTL1Q9H114 145 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 KIR3DX1Q9H7L2 352 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 YIPF1Q9Y548 306 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 NUP210Q8TEM1 1887 aaPredicted RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 TRAV8-7A0A075B6U6 113 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 A0A0G2JN53 185 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 SMIM35A0A1B0GVV1 85 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 A0A1W2PS29 197 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 A6NCN8 305 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 OR4C45A6NMZ5 311 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HSPB2A8KAH6 182 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 A8MVM7 634 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TNFSF13O75888 250 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 KAT7O95251 611 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 PNPP00491 289 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 OR3A2P47893 321 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 ARF5P84085 180 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 PMPCAQ10713 525 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HSPB2Q16082 182 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 ZNF684Q5T5D7 378 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 NXPE4Q6UWF7 544 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 GBGT1Q8N5D6 347 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 HIST1H2AAQ96QV6 131 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 LYSMD1Q96S90 227 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
USP3-203ENST00000538686 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 MED31Q9Y3C7 131 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 COLEC10Q9Y6Z7 277 aa11.13□□□□□ -0.63
USP3-203ENST00000538686 TTC3P53804 2025 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 LEFTY2O00292 366 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 F3P13726 295 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 SLC25A1P53007 311 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 TBPL1P62380 186 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
USP3-203ENST00000538686 VAMP2P63027 116 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
USP3-203ENST00000538686 FAM166AQ6J272 317 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 OLIG3Q7RTU3 272 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 EXD3Q8N9H8 876 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 OR13C9Q8NGT0 318 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 AQP3Q92482 292 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 MCHR2Q969V1 340 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 C16orf58Q96GQ5 468 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 GLIPR2Q9H4G4 154 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 A0A087WV62 115 aa11.12□□□□□ -0.63
USP3-203ENST00000538686 MASP2O00187 686 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms