RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SRSF10O75494 262 aaKnown RBP16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 BPNT1O95861 308 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 GAPDHP04406 335 aaKnown RBP16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 HKR1P10072 659 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 RPS21P63220 83 aaKnown RBP16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 QRFPP83859 136 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 ANKRD55Q3KP44 614 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 C9orf152Q5JTZ5 239 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 FNDC7Q5VTL7 733 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 CBLN3Q6UW01 205 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 KDM8Q8N371 416 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 OR52N5Q8NH56 324 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 SLC16A7O60669 478 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 JTBO76095 146 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 NPY4RP50391 375 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 S100A10P60903 97 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 SUPT4H1P63272 117 aaKnown RBP16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 RHEBQ15382 184 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 VAX1Q5SQQ9 334 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 METTL21AQ8WXB1 218 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 SPSB2Q99619 263 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 WDR77Q9BQA1 342 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 MESP1Q9BRJ9 268 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 S1PR5Q9H228 398 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 OPA3Q9H6K4 179 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 PRR13Q9NZ81 148 aa16.58■□□□□ 0.24
SFSWAP-207ENST00000538548 IGLV1-36A0A0B4J1U3 117 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 PRSS38A1L453 326 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 RHPN2P1A8MT19 583 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 APBB3O95704 486 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 TSPAN15O95858 294 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 IFNA17P01571 189 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 VSIG8P0DPA2 414 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 DAOP14920 347 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 GPX4P36969 197 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SULT1A1P50225 295 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SQSTM1Q13501 440 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 NCMAPQ5T1S8 102 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 VITQ6UXI7 678 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 GKN2Q86XP6 184 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 OR1J1Q8NGS3 322 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 C16orf52Q8NHV5 167 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 MEMO1Q9Y316 297 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 C11orf98E9PRG8 122 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SLC34A2O95436 690 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 RD3LP0DJH9 198 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 PVRP15151 417 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SNCAP37840 140 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 INSM1Q01101 510 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 DEFA6Q01524 100 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 ACTBL2Q562R1 376 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 C9orf50Q5SZB4 431 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 OR9K2Q8NGE7 335 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SCGB3A2Q96PL1 93 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 SPACA1Q9HBV2 294 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 G6PC2Q9NQR9 355 aa16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 MRPS23Q9Y3D9 190 aaKnown RBP16.57■□□□□ 0.24
SFSWAP-207ENST00000538548 LMX1BO60663 402 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 HPGDP15428 266 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 FPR2P25090 351 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 HSD11B1P28845 292 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 BIKQ13323 160 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 MARCH3Q86UD3 253 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 BAHD1Q8TBE0 780 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 C20orf24Q9BUV8 137 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 OR52A1Q9UKL2 312 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 POM121BA6NF01 834 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 TGFBR3LH3BV60 316 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 HOXC4P09017 264 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 MAS1LP35410 378 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 FAM3AP98173 230 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 RTL10Q7L3V2 364 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 PEG10Q86TG7 708 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 FAM219AQ8IW50 185 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 GSKIPQ9P0R6 139 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 ANAPC10Q9UM13 185 aa16.56■□□□□ 0.24
SFSWAP-207ENST00000538548 A0A1W2PQU0 124 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 KLK3P07288 261 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 CTLA4P16410 223 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 C5AR1P21730 350 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 GPR3P46089 330 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 RPL27P61353 136 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 ACKR1Q16570 336 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 GUK1Q16774 197 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 SLC22A24Q8N4F4 322 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 ZNF524Q96C55 264 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 SCRT1Q9BWW7 348 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 RAB33BQ9H082 229 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 UBQLN4Q9NRR5 601 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 STARD5Q9NSY2 213 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 VSX1Q9NZR4 365 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 HOXB5P09067 269 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 HOXA5P20719 270 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 GDI1P31150 447 aa16.55■□□□□ 0.24
SFSWAP-207ENST00000538548 UCP2P55851 309 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms