RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ARHGDIGQ99819 225 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM59Q9BXS4 323 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GNG13Q9P2W3 67 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PITPNC1Q9UKF7 332 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TCFL5Q9UL49 500 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BRCA1P38398 1863 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 A6NIZ1 184 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 H0Y8G0 127 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PHF1O43189 567 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 VEGFDO43915 354 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF865P0CJ78 1059 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CPMP14384 443 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ASCL1P50553 236 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RAP1BP61224 184 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SKP2Q13309 424 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 DEFB110Q30KQ9 67 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GLIPR1L1Q6UWM5 242 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ERN2Q76MJ5 926 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 LINC00346Q8IVM7 164 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ADAMTS17Q8TE56 1095 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BORCS7Q96B45 105 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TCTN2Q96GX1 697 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PEX11GQ96HA9 241 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CABLES2Q9BTV7 478 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 NXF5Q9H1B4 397 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CHST11Q9NPF2 352 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 MOKQ9UQ07 419 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 MDFIC2A0A1B0GVS7 189 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM202A6NGA9 273 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 H7BYZ3 331 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GPR37O15354 613 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 XRCC2O43543 280 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 APOA2P02652 100 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CCKARP32238 428 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 HRH1P35367 487 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RPS27P42677 84 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SULT1A2P50226 295 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 FAM3AP98173 230 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 C2orf76Q3KRA6 126 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PHLDA2Q53GA4 152 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RBMS3Q6XE24 437 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEFF1Q8IYR6 380 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 LRRC18Q8N456 261 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 C17orf47Q8NEP4 570 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TVP23CQ96ET8 276 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 AQP10Q96PS8 301 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SLC35B3Q9H1N7 401 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 METTL7AQ9H8H3 244 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RAB18Q9NP72 206 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZDHHC4Q9NPG8 344 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GPR173Q9NS66 373 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PEX12O00623 359 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLCO2B1O94956 709 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GNB3P16520 340 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SNCAP37840 140 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PRLHRP49683 370 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PGFP49763 221 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 H2BFSP57053 126 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IQCJQ1A5X6 159 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 LIPNQ5VXI9 398 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 LCN15Q6UWW0 184 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 OR51A4Q8NGJ6 313 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GPR119Q8TDV5 335 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 FGGYQ96C11 551 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PLK3Q9H4B4 646 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 HPNP05981 417 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ANKRD34CP0C6C1 535 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 HIST1H1CP16403 213 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 NUTF2P61970 127 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 AGERQ15109 404 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 RTL6Q6ICC9 239 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PRSS54Q6PEW0 395 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 OR5L1Q8NGL2 311 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 DIO2Q92813 273 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 VOPP1Q96AW1 172 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 MS4A8Q9BY19 250 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 HRASLS2Q9NWW9 162 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PIKFYVEQ9Y2I7 2098 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GLCEO94923 617 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IL2RAP01589 272 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 CRHP06850 196 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SURF2Q15527 256 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ARHGAP11BQ3KRB8 267 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 OR4D9Q8NGE8 314 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF596Q8TC21 504 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 BANF2Q9H503 90 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GCM1Q9NP62 436 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC23A2Q9UGH3 650 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 EMC9Q9Y3B6 208 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 F5H5K5 113 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 RAB27BO00194 218 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SDCBPO00560 298 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SOX15O60248 233 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms