RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMEM223A0PJW6 202 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 GABRR3A8MPY1 467 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CENPXA8MT69 81 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 DNASE2O00115 360 aaPredicted RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 ERI3O43414 337 aaKnown RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CHMP2AO43633 222 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 GCM2O75603 506 aaPredicted RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 SLC22A5O76082 557 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 OXTP01178 125 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CATP04040 527 aaKnown RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 GLAP06280 429 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 PPICP45877 212 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 NDUFA8P51970 172 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CDK5Q00535 292 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CYP24A1Q07973 514 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CAVIN4Q5BKX8 364 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 TPRG1LQ5T0D9 272 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 FAM71E1Q6IPT2 247 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 LGI3Q8N145 548 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 OR52K1Q8NGK4 314 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF488Q96MN9 340 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 FBXO44Q9H4M3 255 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF430Q9H8G1 570 aaPredicted RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 SLC38A10Q9HBR0 1119 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 CD209Q9NNX6 404 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 PRSS16Q9NQE7 514 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 YTHDF2Q9Y5A9 579 aaKnown RBP3.35□□□□□ -1.87
PRKDC-208ENST00000536710 UBIAD1Q9Y5Z9 338 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 PCDH11XQ9BZA7 1347 aa3.35□□□□□ -1.87
PRKDC-208ENST00000536710 SLC22A20A6NK97 555 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 NDUFC2-KCTD14E9PQ53 114 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 RBFOX2O43251 390 aaKnown RBP eCLIP3.34□□□□□ -1.87
PRKDC-208ENST00000536710 SLC16A7O60669 478 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 REM1O75628 298 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 YIF1AO95070 293 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 APCSP02743 223 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 RHOXF2BP0C7M4 288 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 OR8U9P0C7N5 309 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF32P17041 273 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 GGT2P36268 569 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 LOXL1Q08397 574 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-208ENST00000536710 EBI3Q14213 229 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 C5orf64Q2M2E5 130 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 MPV17L2Q567V2 206 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 SAXO2Q658L1 398 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 Q6ZR03 302 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 FBXO36Q8NEA4 188 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 OR4K5Q8NGD3 323 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 UBALD1Q8TB05 177 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 TCP10LQ8TDR4 215 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 RCN3Q96D15 328 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 OR52D1Q9H346 318 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 ZMAT5Q9UDW3 170 aaKnown RBP3.34□□□□□ -1.87
PRKDC-208ENST00000536710 TSSC4Q9Y5U2 329 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-208ENST00000536710 KPTNQ9Y664 436 aa3.34□□□□□ -1.87
PRKDC-208ENST00000536710 FHOD3Q2V2M9 1422 aa3.34□□□□□ -1.88
PRKDC-208ENST00000536710 ADAMTS13Q76LX8 1427 aa3.34□□□□□ -1.88
PRKDC-208ENST00000536710 PRRC2AP48634 2157 aaKnown RBP3.34□□□□□ -1.88
PRKDC-208ENST00000536710 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 A0A1W2PPV4 95 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 TGM6O95932 706 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 OTCP00480 354 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF806P0C7X5 589 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 IGFBP3P17936 291 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-208ENST00000536710 KIR3DL2P43630 455 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 CLDN6P56747 220 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF684Q5T5D7 378 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 CDKL3Q8IVW4 592 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF695Q8IW36 515 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 OR10W1Q8NGF6 305 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 OR10G6Q8NH81 332 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 ASZ1Q8WWH4 475 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 NEURL3Q96EH8 262 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 RRAGDQ9NQL2 400 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-208ENST00000536710 PRO0461Q9UI25 63 aa3.33□□□□□ -1.88
PRKDC-208ENST00000536710 A0A0U1RQV1 116 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 HACD1B0YJ81 288 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 H3BN98 237 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 CHST10O43529 356 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF324O75467 553 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 MRPL3P09001 348 aaKnown RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 BMI1P35226 326 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 CFHR2P36980 270 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 CCNG1P51959 295 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 STK38Q15208 465 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 OR2T5Q6IEZ7 315 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 WDR86Q86TI4 376 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 RAB43Q86YS6 212 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 OR2T29Q8NH02 315 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 FRZBQ92765 325 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 RERGQ96A58 199 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 FGF23Q9GZV9 251 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 TDRD3Q9H7E2 651 aaKnown RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 FLVCR2Q9UPI3 526 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms