RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ASB9Q96DX5 294 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 PLEKHA8Q96JA3 519 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 RBM4Q9BWF3 364 aaKnown RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 DDX28Q9NUL7 540 aaKnown RBP12.96□□□□□ -0.33
CPSF1-211ENST00000533492 ARMC1Q9NVT9 282 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 VNN3Q9NY84 501 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 LRCH1Q9Y2L9 728 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 INSIG2Q9Y5U4 225 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 COMMD3-BMI1R4GMX3 469 aa12.96□□□□□ -0.33
CPSF1-211ENST00000533492 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 CD300LBA8K4G0 201 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 A8MXK9 166 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 H3BN98 237 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 T-ENOLP0DO92 83 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 RAP2AP10114 183 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF3P17036 446 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 SPI1P17947 270 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 CA6P23280 308 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 GATA4P43694 442 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 PRKXP51817 358 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 SLC25A1P53007 311 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 GNB2P62879 340 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF92Q03936 586 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 MAB21L1Q13394 359 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 SNAI3Q3KNW1 292 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 KLBQ86Z14 1044 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 GIPC3Q8TF64 312 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 GCDHQ92947 438 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-211ENST00000533492 OTULINQ96BN8 352 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 SLAMF6Q96DU3 332 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 NEIL1Q96FI4 390 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-211ENST00000533492 KCNJ15Q99712 375 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 TMEM246Q9BRR3 403 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 THTPAQ9BU02 230 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 CHID1Q9BWS9 393 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 SSBP3Q9BWW4 388 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-211ENST00000533492 NTN4Q9HB63 628 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
CPSF1-211ENST00000533492 A0A1B0GWJ7 208 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 GNGT2O14610 69 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 CST1P01037 141 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 PMELP40967 661 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 CD200P41217 278 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 SLC15A1P46059 708 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 GK3PQ14409 553 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 BTNL3Q6UXE8 466 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 SPATC1Q76KD6 591 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 OR8B3Q8NGG8 313 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 OR2AE1Q8NHA4 323 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 CLPTM1LQ96KA5 538 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 OR8B2Q96RD0 313 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 FEVQ99581 238 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 NIPSNAP1Q9BPW8 284 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 NMNAT2Q9BZQ4 307 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 C1orf21Q9H246 121 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 NUP50Q9UKX7 468 aa12.94□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF878C9JN71 531 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 GMDSO60547 372 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 FAM20BO75063 409 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 FSTL3O95633 263 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 FSHBP01225 129 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 CLUP10909 449 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 SLC2A1P11166 492 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-211ENST00000533492 EIF2B1Q14232 305 aaKnown RBP12.93□□□□□ -0.34
CPSF1-211ENST00000533492 PCK2Q16822 640 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 ZNF404Q494X3 552 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 TEX30Q5JUR7 227 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 GLYATL3Q5SZD4 288 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 CD300LDQ6UXZ3 194 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 Q8TCH9 128 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 ADAT1Q9BUB4 502 aaKnown RBP12.93□□□□□ -0.34
CPSF1-211ENST00000533492 FN3KRPQ9HA64 309 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 CMC2Q9NRP2 79 aa12.93□□□□□ -0.34
CPSF1-211ENST00000533492 TBX1O43435 398 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 XRCC2O43543 280 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 PSKH1P11801 424 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 POU1F1P28069 291 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 HSD11B1P28845 292 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 CD80P33681 288 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 PITPNBP48739 271 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
CPSF1-211ENST00000533492 PAX8Q06710 450 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 MZT1Q08AG7 82 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 MPPED2Q15777 294 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 ERI1Q8IV48 349 aaKnown RBP12.92□□□□□ -0.34
CPSF1-211ENST00000533492 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 OR6N2Q8NGY6 317 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 RAB40AQ8WXH6 277 aa12.92□□□□□ -0.34
CPSF1-211ENST00000533492 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms