RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
SSBP3-214ENST00000533209 SP140LQ9H930 580 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 MSL2Q9HCI7 577 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 BRD7Q9NPI1 651 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 CYSLTR2Q9NS75 346 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 ZNF319Q9P2F9 582 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 IKZF2Q9UKS7 526 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 N6AMT1Q9Y5N5 214 aa10.21□□□□□ -0.77
SSBP3-214ENST00000533209 ACANP16112 2415 aa10.21□□□□□ -0.78
SSBP3-214ENST00000533209 IGHV4-30-2A0A087WSY4 118 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 A0A1W2PQL4 384 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 SNTNA6NMZ2 147 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 H0YAE9 185 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 TBX1O43435 398 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 XRCC2O43543 280 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 SPRY3O43610 288 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 LILRA1O75019 489 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 SRSF10O75494 262 aaKnown RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 HPXP02790 462 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 GNAO1P09471 354 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 DBTP11182 482 aaKnown RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 SELEP16581 610 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 DCTDP32321 178 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 CAPGP40121 348 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 CCL8P80075 99 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 IL5RAQ01344 420 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 CDK5R2Q13319 367 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 ZNF684Q5T5D7 378 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 CLEC2AQ6UVW9 174 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 MRPL21Q7Z2W9 205 aaKnown RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 OR8G5Q8NG78 346 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 FAM168AQ92567 244 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 SGK3Q96BR1 496 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 LGALS12Q96DT0 336 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 Q96MT0 163 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 MROQ9BYG7 248 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 VCXQ9H320 206 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 AMBNQ9NP70 447 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 MYOZ1Q9NP98 299 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 DLL4Q9NR61 685 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 FAM206AQ9NX38 181 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 MRM2Q9UI43 246 aaKnown RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 ZDHHC8Q9ULC8 765 aa10.2□□□□□ -0.78
SSBP3-214ENST00000533209 EXOGQ9Y2C4 368 aaKnown RBP10.2□□□□□ -0.78
SSBP3-214ENST00000533209 VPS13CQ709C8 3753 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 A0A1B0GWJ7 208 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 CD300LBA8K4G0 201 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 LYNX1G3V0Z9 82 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 ATP6V1G2O95670 118 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 CD55P08174 381 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 CSF3P09919 207 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 LYNX1P0DP58 116 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 PDLIM4P50479 330 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 RIDAP52758 137 aaKnown RBP10.19□□□□□ -0.78
SSBP3-214ENST00000533209 AQP4P55087 323 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 ISL1P61371 349 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 ZNF85Q03923 595 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 EGR3Q06889 387 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 IL18R1Q13478 541 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 SMN1Q16637 294 aaKnown RBP10.19□□□□□ -0.78
SSBP3-214ENST00000533209 TSTQ16762 297 aaKnown RBP10.19□□□□□ -0.78
SSBP3-214ENST00000533209 ZMAT1Q5H9K5 638 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 CIARTQ8N365 385 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-214ENST00000533209 ZNF786Q8N393 782 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 BHLHE23Q8NDY6 225 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 SETD9Q8NE22 299 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 OR10H4Q8NGA5 316 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 OR8B12Q8NGG6 310 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 OR52H1Q8NGJ2 320 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 CNIH3Q8TBE1 160 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 UBASH3BQ8TF42 649 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 TFAP2CQ92754 450 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 PGAM5Q96HS1 289 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 DIRC2Q96SL1 478 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 SLC30A2Q9BRI3 323 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 RHNO1Q9BSD3 238 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 OR10A2Q9H208 303 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 OPA3Q9H6K4 179 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 MRPS18AQ9NVS2 196 aaKnown RBP10.19□□□□□ -0.78
SSBP3-214ENST00000533209 HSPE1-MOB4S4R3N1 261 aa10.19□□□□□ -0.78
SSBP3-214ENST00000533209 hCG_38984A0A1B0GV85 526 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 TMEM269A0A1B0GVZ9 245 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 LOC390937A0A1W2PQ73 354 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 ACOD1A6NK06 481 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 H0YJX3 145 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 H7C1Q1 480 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 PNPP00491 289 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 CD99P14209 185 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 COL8A2P25067 703 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 MMP16P51512 607 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 MRPS11P82912 194 aaKnown RBP10.18□□□□□ -0.78
SSBP3-214ENST00000533209 FAM3AP98173 230 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 MFGE8Q08431 387 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-214ENST00000533209 CARTPTQ16568 116 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 TIGD6Q17RP2 521 aa10.18□□□□□ -0.78
SSBP3-214ENST00000533209 ZNF829Q3KNS6 432 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-214ENST00000533209 SPRNQ5BIV9 151 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms