RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 MIOXQ9UGB7 285 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 OR5V1Q9UGF6 321 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 INSIG2Q9Y5U4 225 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 ANK2Q01484 3957 aa19.68■□□□□ 0.74
SMPD1-209ENST00000533196 TRAPPC2LH3BP13 241 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 DYNC1I1O14576 645 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 ACOT8O14734 319 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 SOX14O95416 240 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 CYB5R3P00387 301 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-209ENST00000533196 CST1P01037 141 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 HLA-DPB1P04440 258 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 SPARCP09486 303 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 IRF2P14316 349 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF154Q13106 437 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 TAF13Q15543 124 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 BPIFB2Q8N4F0 458 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 OR11L1Q8NGX0 322 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 CCDC124Q96CT7 223 aaKnown RBP19.67■□□□□ 0.74
SMPD1-209ENST00000533196 SLAMF6Q96DU3 332 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 CHID1Q9BWS9 393 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 AUP1Q9Y679 476 aa19.67■□□□□ 0.74
SMPD1-209ENST00000533196 CD300LBA8K4G0 201 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF878C9JN71 531 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF593O00488 134 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-209ENST00000533196 GMDSO60547 372 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 RPS2P15880 293 aaKnown RBP19.66■□□□□ 0.74
SMPD1-209ENST00000533196 GRK5P34947 590 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 SLC15A1P46059 708 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 SEC61A1P61619 476 aaKnown RBP19.66■□□□□ 0.74
SMPD1-209ENST00000533196 MAB21L1Q13394 359 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF404Q494X3 552 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 LYPD4Q6UWN0 246 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 ADGRG5Q8IZF4 528 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 ZNF511Q8NB15 262 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 PLPP7Q8NBV4 271 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 FAM216AQ8WUB2 273 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 PLEKHA8Q96JA3 519 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 FEVQ99581 238 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 NIPSNAP1Q9BPW8 284 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 MRI1Q9BV20 369 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 MMP26Q9NRE1 261 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 MRPL15Q9P015 296 aaKnown RBP19.66■□□□□ 0.74
SMPD1-209ENST00000533196 PPIAL4AQ9Y536 164 aa19.66■□□□□ 0.74
SMPD1-209ENST00000533196 XRCC2O43543 280 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 GYPBP06028 91 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 GRB2P62993 217 aaKnown RBP19.65■□□□□ 0.74
SMPD1-209ENST00000533196 SNAI3Q3KNW1 292 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 LINC01590Q5TEZ4 76 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 RHOUQ7L0Q8 258 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 KLBQ86Z14 1044 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 SPERTQ8NA61 448 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 OR6K6Q8NGW6 343 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 NEIL1Q96FI4 390 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-209ENST00000533196 CLPTM1LQ96KA5 538 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 TMEM246Q9BRR3 403 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 THTPAQ9BU02 230 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 SSBP3Q9BWW4 388 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-209ENST00000533196 TOR3AQ9H497 397 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 SP140LQ9H930 580 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 NTN4Q9HB63 628 aa19.65■□□□□ 0.74
SMPD1-209ENST00000533196 GGT3PA6NGU5 568 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 PTBP3O95758 552 aaKnown RBP19.64■□□□□ 0.73
SMPD1-209ENST00000533196 APOC1P02654 83 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 PSKH1P11801 424 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 RBMXP38159 391 aaKnown RBP19.64■□□□□ 0.73
SMPD1-209ENST00000533196 PMELP40967 661 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 ZNF92Q03936 586 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 OR8G1Q15617 311 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 DNAL1Q4LDG9 190 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 ARMCX4Q5H9R4 360 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 NLRC3Q7RTR2 1065 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 DVL3Q92997 716 aaPredicted RBP19.64■□□□□ 0.73
SMPD1-209ENST00000533196 CENPMQ9NSP4 180 aa19.64■□□□□ 0.73
SMPD1-209ENST00000533196 DHRS12A0PJE2 317 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 H3BN98 237 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 HAX1O00165 279 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 GNGT2O14610 69 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 PPIAL4GP0DN37 164 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 CLUP10909 449 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 PAICSP22234 425 aaKnown RBP19.63■□□□□ 0.73
SMPD1-209ENST00000533196 DDOSTP39656 456 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 PRKXP51817 358 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 PRSS12P56730 875 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 PAX8Q06710 450 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 MZT1Q08AG7 82 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 GLYATL3Q5SZD4 288 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 LRRN1Q6UXK5 716 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 DCDC5Q6ZRR9 648 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 SHFQ7M4L6 423 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 TRPM8Q7Z2W7 1104 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 OR8B3Q8NGG8 313 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 OR2AE1Q8NHA4 323 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 CANT1Q8WVQ1 401 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 SPSB4Q96A44 273 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 OR8B2Q96RD0 313 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 SLC6A7Q99884 636 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 ADAT1Q9BUB4 502 aaKnown RBP19.63■□□□□ 0.73
SMPD1-209ENST00000533196 YY1AP1Q9H869 796 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 MARCH7Q9H992 704 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 FN3KRPQ9HA64 309 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms