RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CASP8AP2Q9UKL3 1982 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 HLA-HP01893 362 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 OR10J4P0C629 311 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 ABCD3P28288 659 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SSPNQ14714 243 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 CEACAM16Q2WEN9 425 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 CCDC71Q8IV32 467 aaPredicted RBP13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SLC30A7Q8NEW0 376 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 GPBAR1Q8TDU6 330 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SLC6A13Q9NSD5 602 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF816-ZNF321PA0A0X1KG74 233 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 WDR1O75083 606 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 POU2F2P09086 479 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ANKRD37Q7Z713 158 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 LIPAP38571 399 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 HIST2H3PS2Q5TEC6 136 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 KIRREL2Q6UWL6 708 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 SUMF1Q8NBK3 374 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 HSD17B11Q8NBQ5 300 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 FOXB1Q99853 325 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 C20orf202A1L168 122 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 TFAP2AP05549 437 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 HPNP05981 417 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM11P17152 192 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ADRA2CP18825 462 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 DUSP1P28562 367 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 PPT1P50897 306 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 SIGLEC11Q96RL6 698 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 GNB1P62873 340 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ERHP84090 104 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF85Q03923 595 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 OPCMLQ14982 345 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 PTOV1Q86YD1 416 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF547Q8IVP9 402 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 SARGQ9BW04 601 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 EXOSC3Q9NQT5 275 aaKnown RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 CHST2Q9Y4C5 530 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 ZAR1LA6NP61 321 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 IMPA2O14732 288 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 JUNBP17275 347 aaPredicted RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 TOMM34Q15785 309 aaPredicted RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 OR1J1Q8NGS3 322 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 SAV1Q9H4B6 383 aaPredicted RBP13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 PPIL1Q9Y3C6 166 aa13.34□□□□□ -0.27
PCDHA9-202ENST00000532602 CT45A10P0DMU9 189 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 AQP6Q13520 282 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC17A1Q14916 467 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 POU4F3Q15319 338 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 PWWP2BQ6NUJ5 590 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF75AQ96N20 296 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 COL13A1Q5TAT6 717 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 OR4D9Q8NGE8 314 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 FBXO17Q96EF6 278 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 TOX3O15405 576 aaPredicted RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 ALOX5APP20292 161 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 C20orf85Q9H1P6 137 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 ACKR3P25106 362 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC51BQ86UW2 128 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 FJX1Q86VR8 437 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 NOXO1Q8NFA2 376 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 NPAP1Q9NZP6 1156 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 MEOX1P50221 254 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 BTLAQ7Z6A9 289 aa13.33□□□□□ -0.28
PCDHA9-202ENST00000532602 A0A087WUJ7 227 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 TCRBV5S2A0A599 114 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 HAAOP46952 286 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 LRRC10Q5BKY1 277 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ACER2Q5QJU3 275 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ADGRG3Q86Y34 549 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 CDCA4Q9BXL8 241 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC23A1Q9UHI7 598 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 FLVCR1Q9Y5Y0 555 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 CCR6P51684 374 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 TAS2R45P59539 299 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC36A1Q7Z2H8 476 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms