RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 A0A0B4J2A0 478 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 A0A1W2PR80 420 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 MASP2O00187 686 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 HSD17B6O14756 317 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 LYZL6O75951 148 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 NRASP01111 189 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CTXN2P0C2S0 81 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CASP3P42574 277 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 DOC2BQ14184 412 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SPATA46Q5T0L3 261 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 OR51F2Q8NH61 342 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 AKR7LQ8NHP1 331 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 C11orf54Q9H0W9 315 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 C20orf85Q9H1P6 137 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SHPKQ9UHJ6 478 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 DOCK5Q9H7D0 1870 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 PRR35P0CG20 571 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 ZIC1Q15915 447 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 LHFPL2Q6ZUX7 228 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 BATF2Q8N1L9 274 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 AMER3Q8N944 861 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 TMEM43Q9BTV4 400 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 MMP25Q9NPA2 562 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 EXO1Q9UQ84 846 aaKnown RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 ZNF638Q14966 1978 aaKnown RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CYC1P08574 325 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 ELK1P19419 428 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 NPY4RP50391 375 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 TLE4Q04727 773 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 EBPQ15125 230 aaKnown RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 IAH1Q2TAA2 248 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 PLXDC2Q6UX71 529 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SLCO1C1Q9NYB5 712 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 FADS1O60427 444 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 HBE1P02100 147 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SP1P08047 785 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CSF3P09919 207 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 NKX6-1P78426 367 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 PHLDA2Q53GA4 152 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 TFAP2EQ6VUC0 442 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 FJX1Q86VR8 437 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SCPEP1Q9HB40 452 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 COPS3Q9UNS2 423 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SULT1C4O75897 302 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SNAPINO95295 136 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CCR6P51684 374 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 BHLHA15Q7RTS1 189 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 SLC35G3Q8N808 338 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 HEYLQ9NQ87 328 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-221ENST00000532331 ATG2BQ96BY7 2078 aa10.16□□□□□ -0.78
PTPRK-221ENST00000532331 NDUFB3O43676 98 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 LRP3O75074 770 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CTU2Q2VPK5 515 aaKnown RBP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 RIMKLAQ8IXN7 391 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 OR2Z1Q8NG97 314 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 GUCD1Q96NT3 240 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 SLC26A1Q9H2B4 701 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 ISYNA1Q9NPH2 558 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 NDUFB11Q9NX14 153 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 AMDHD2Q9Y303 409 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 AADACP22760 399 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 AQP6Q13520 282 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 HNF4GQ14541 408 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 OPCMLQ14982 345 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 OR4C3Q8NH37 302 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 ZNF501Q96CX3 271 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 BIN3Q9NQY0 253 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 TRIP11Q15643 1979 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 SIRPB1O00241 398 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 TBX19O60806 448 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A6P0DMU7 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A5P0DMU8 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A7P0DMV0 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A8P0DMV1 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A9P0DMV2 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 MRPS34P82930 218 aaKnown RBP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 KRTCAP3Q53RY4 240 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A2Q5DJT8 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A1Q5HYN5 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 PAQR6Q6TCH4 344 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CT45A3Q8NHU0 189 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 NANPQ8TBE9 248 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CLDN23Q96B33 292 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 KTI12Q96EK9 354 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 GPR84Q9NQS5 396 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 KCNIP2Q9NS61 270 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 HIF1ANQ9NWT6 349 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 MRPS18BQ9Y676 258 aaKnown RBP10.15□□□□□ -0.78
PTPRK-221ENST00000532331 KCNE3Q9Y6H6 103 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 SLCO1B1Q9Y6L6 691 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CNTRLQ7Z7A1 2325 aa10.15□□□□□ -0.78
PTPRK-221ENST00000532331 CEP290O15078 2479 aa10.15□□□□□ -0.79
PTPRK-221ENST00000532331 FITM1A5D6W6 292 aa10.15□□□□□ -0.79
PTPRK-221ENST00000532331 TMEM200CA6NKL6 621 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms