RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ABCA7Q8IZY2 2146 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 COL4A3Q01955 1670 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 SULT2B1O00204 365 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 BGLAPP02818 100 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 GABREP78334 506 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 TDGQ13569 410 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 C8orf44Q96CB5 159 aa10.14□□□□□ -0.79
NXF1-211ENST00000531709 MRPS24Q96EL2 167 aaKnown RBP10.14□□□□□ -0.79
NXF1-211ENST00000531709 METTL12A8MUP2 240 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 WDPCPO95876 746 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CBR1P16152 277 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SCAND1P57086 179 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SSBP1Q04837 148 aaKnown RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 PDZK1IP1Q13113 114 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 IAH1Q2TAA2 248 aaPredicted RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 RAET1LQ5VY80 246 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CATSPERDQ86XM0 798 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 NICN1Q9BSH3 213 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SLC17A5Q9NRA2 495 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 KLHL13Q9P2N7 655 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 FAM230AA0A1W2PPH8 454 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 ALG1L2C9J202 215 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 STMND1H3BQB6 276 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SCGNO76038 276 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 IGHV4-34P06331 123 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 FCGR2AP12318 317 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CTRB1P17538 263 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CD80P33681 288 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SPIN3Q5JUX0 258 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 PHF19Q5T6S3 580 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CTRB2Q6GPI1 263 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 MRPL38Q96DV4 380 aaKnown RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 PRMT8Q9NR22 394 aaPredicted RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 PLEK2Q9NYT0 353 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 HSPB2A8KAH6 182 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 G3V3Q6 166 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 TSPAN15O95858 294 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 ITGB2P05107 769 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CCNOP22674 350 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 FOXF1Q12946 379 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 FAM189A2Q15884 450 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 HSPB2Q16082 182 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 PLEKHN1Q494U1 663 aaPredicted RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 EXOSC6Q5RKV6 272 aaKnown RBP10.13□□□□□ -0.79
NXF1-211ENST00000531709 OVCH2Q7RTZ1 564 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 BATF2Q8N1L9 274 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 TERB2Q8NHR7 220 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 VN1R1Q9GZP7 353 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 SHARPINQ9H0F6 387 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 ZNF700Q9H0M5 742 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 RGCCQ9H4X1 137 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 CHST11Q9NPF2 352 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 RASL12Q9NYN1 266 aa10.13□□□□□ -0.79
NXF1-211ENST00000531709 LOC101059948A0A1B0GTJ6 334 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 RER1O15258 196 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 HPP00738 406 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 FGF2P09038 288 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 PNLIPRP2P54317 469 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 PEA15Q15121 130 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 INPP5JQ15735 1006 aaPredicted RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 SULF2Q8IWU5 870 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 C9orf40Q8IXQ3 194 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 OR56B1Q8NGI3 324 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 FNDC9Q8TBE3 224 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SULT4A1Q9BR01 284 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 CRB3Q9BUF7 120 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SLC22A11Q9NSA0 550 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SLC5A6Q9Y289 635 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 CCDC163A0A0D9SF12 145 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 NPIPA2E9PIF3 369 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 NPIPA3F8WFD2 350 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 K7EPK0 472 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 NUDT21O43809 227 aaKnown RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 ZNF354AO60765 605 aaPredicted RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 ZNF14P17017 642 aaPredicted RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 MST1P26927 711 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 CLDN17P56750 224 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 FAM71E2Q8N5Q1 922 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 TMEM156Q8N614 296 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 ROBO4Q8WZ75 1007 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SLC25A28Q96A46 364 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 ADAT3Q96EY9 351 aaPredicted RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 NPAS1Q99742 590 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 OR10A2Q9H208 303 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 EXOSC3Q9NQT5 275 aaKnown RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 AHCTF1Q8WYP5 2266 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 A0A1W2PP11 408 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 SOCS1O15524 211 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 FOLR1P15328 257 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 PPIAP62937 165 aaKnown RBP10.12□□□□□ -0.79
NXF1-211ENST00000531709 OR1N1Q8NGS0 311 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 OR1L3Q8NH93 324 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 ARHGAP5-AS1Q96IT6 56 aa10.12□□□□□ -0.79
NXF1-211ENST00000531709 TNFSF18Q9UNG2 199 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms