RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 NME4O00746 187 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 ADAM20O43506 726 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 SERPINA1P01009 418 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 LCATP04180 440 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
CTSB-221ENST00000531502 CA6P23280 308 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 GGT2P36268 569 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 CENPAP49450 140 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 TRAP1Q12931 704 aaKnown RBP11.88□□□□□ -0.51
CTSB-221ENST00000531502 ECH1Q13011 328 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 OR8G1Q15617 311 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 KCNJ8Q15842 424 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 DNM1P34Q6PK57 102 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 Q6ZSV7 163 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 FKBP9P1Q75LS8 142 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 PGAP1Q75T13 922 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 ZBTB46Q86UZ6 589 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 PNLDC1Q8NA58 520 aaKnown RBP11.88□□□□□ -0.51
CTSB-221ENST00000531502 ZSCAN4Q8NAM6 433 aaPredicted RBP11.88□□□□□ -0.51
CTSB-221ENST00000531502 PLPP7Q8NBV4 271 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 LHX4Q969G2 390 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 UBE2FQ969M7 185 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 PITX2Q99697 317 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 FUZQ9BT04 418 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 NDUFAF4Q9P032 175 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 KIF17Q9P2E2 1029 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 AP3M1Q9Y2T2 418 aa11.88□□□□□ -0.51
CTSB-221ENST00000531502 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 C5orf63A6NC05 138 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 UNC119BA6NIH7 251 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 CD300LBA8K4G0 201 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 NDUFA2O43678 99 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 GMDSO60547 372 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 ARF6P62330 175 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 SF3A3Q12874 501 aaKnown RBP eCLIP11.87□□□□□ -0.515e-6■■■■■ 39.5
CTSB-221ENST00000531502 MALLQ13021 153 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 C8orf82Q6P1X6 216 aaPredicted RBP11.87□□□□□ -0.51
CTSB-221ENST00000531502 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 ARPINQ7Z6K5 226 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
CTSB-221ENST00000531502 SPRYD4Q8WW59 207 aaPredicted RBP11.87□□□□□ -0.51
CTSB-221ENST00000531502 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 C7orf34Q96L11 122 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 ERMAPQ96PL5 475 aaPredicted RBP11.87□□□□□ -0.51
CTSB-221ENST00000531502 NMNAT3Q96T66 252 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 SLC22A4Q9H015 551 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 C16orf95Q9H693 158 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 TCF7L1Q9HCS4 588 aa11.87□□□□□ -0.51
CTSB-221ENST00000531502 MRPL22Q9NWU5 206 aaKnown RBP11.87□□□□□ -0.51
CTSB-221ENST00000531502 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 ARPC3O15145 178 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 OR10H3O60404 316 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 LHBP01229 141 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 GYPAP02724 150 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 HIST1H1CP16403 213 aaKnown RBP11.86□□□□□ -0.51
CTSB-221ENST00000531502 GSK3BP49841 420 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 ZNF92Q03936 586 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 OR8B8Q15620 311 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 RFX4Q33E94 735 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 C11orf91Q3C1V1 193 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 MRPL21Q7Z2W9 205 aaKnown RBP11.86□□□□□ -0.51
CTSB-221ENST00000531502 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
CTSB-221ENST00000531502 TRIM36Q9NQ86 728 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 FAM53CQ9NYF3 392 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 KAAG1Q9UBP8 84 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 NOP16Q9Y3C1 178 aaKnown RBP11.86□□□□□ -0.51
CTSB-221ENST00000531502 CAPN7Q9Y6W3 813 aa11.86□□□□□ -0.51
CTSB-221ENST00000531502 OR6C68A6NDL8 312 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 M0R135 149 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 DVL1O14640 695 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 GSTA4O15217 222 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTSB-221ENST00000531502 RHCEP18577 417 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
CTSB-221ENST00000531502 SLC7A2P52569 658 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 TPTEP56180 551 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 CBX1P83916 185 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 SLC36A3Q495N2 470 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 GDPGP1Q6ZNW5 385 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 PDZD9Q8IXQ8 264 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 OR2AE1Q8NHA4 323 aa11.85□□□□□ -0.51
CTSB-221ENST00000531502 ZNF799Q96GE5 643 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms