RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ABCD4O14678 606 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 ATE1O95260 518 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 PTAFRP25105 342 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 UCP2P55851 309 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 COLCA1Q6ZS62 124 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 OR52H1Q8NGJ2 320 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 OR10AC1Q8NH08 325 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 RPS4Y2Q8TD47 263 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 SGK3Q96BR1 496 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 FAM71F1Q96KD3 344 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-205ENST00000531303 PGLYRP3Q96LB9 341 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 SOX7Q9BT81 388 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 GPR84Q9NQS5 396 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 ADGRG4Q8IZF6 3080 aa16.44■□□□□ 0.22
SMPD1-205ENST00000531303 A1L4Q6 167 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 SMPD2O60906 423 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 TGFBR2P37173 567 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 MAGEB1P43366 347 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 ERVS71-1P61550 626 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 GPR50Q13585 617 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 SLC22A25Q6T423 547 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 ZNF704Q6ZNC4 412 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-205ENST00000531303 OR1J1Q8NGS3 322 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 YIPF6Q96EC8 236 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 REEP6Q96HR9 211 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 ESRP2Q9H6T0 727 aaKnown RBP16.43■□□□□ 0.22
SMPD1-205ENST00000531303 TBCCD1Q9NVR7 557 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 NDUFB11Q9NX14 153 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 ZNF281Q9Y2X9 895 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 LRRK2Q5S007 2527 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 ROS1P08922 2347 aa16.43■□□□□ 0.22
SMPD1-205ENST00000531303 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 LOC107986453A0A1B0GWG9 222 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 UBCP0CG48 685 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 NR4A1P22736 598 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 GADD45AP24522 165 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 PPP1CBP62140 327 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 ZNF92Q03936 586 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 MALLQ13021 153 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 INSL4Q14641 139 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 HLXQ14774 488 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 NCMAPQ5T1S8 102 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 GPR107Q5VW38 600 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 VHLLQ6RSH7 139 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 MEX3BQ6ZN04 569 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 RGP1Q92546 391 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 LYZL4Q96KX0 146 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 SF3B6Q9Y3B4 125 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 PLCE1Q9P212 2302 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 A0A1B0GVI7 797 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 SYT7O43581 403 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 GPRIN2O60269 458 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 EPXP11678 715 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 PCSK6P29122 969 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 GABRA5P31644 462 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 RAD52P43351 418 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 SOX2P48431 317 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 SNTB2Q13425 540 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 TMEM244Q5VVB8 128 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 ADAM5Q6NVV9 412 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 DMRTC2Q8IXT2 367 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 OR51A4Q8NGJ6 313 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 OR5L1Q8NGL2 311 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 TSEN15Q8WW01 171 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 PIK3IP1Q96FE7 263 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 FUNDC2Q9BWH2 189 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 OR51E2Q9H255 320 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 EXOSC4Q9NPD3 245 aaKnown RBP16.42■□□□□ 0.22
SMPD1-205ENST00000531303 FZR1Q9UM11 496 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 SPEF1Q9Y4P9 236 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 ATP23Q9Y6H3 246 aa16.42■□□□□ 0.22
SMPD1-205ENST00000531303 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 A0A0U1RQV5 110 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 LOC100506127A0A0U1RQW1 187 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 A0A1B0GTI1 187 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 SIAH2O43255 324 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 XRCC2O43543 280 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 LMX1BO60663 402 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 CD1AP06126 327 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 CD3EP07766 207 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 ACHEP22303 614 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 PEX19P40855 299 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 BEX5Q5H9J7 111 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 MRPL21Q7Z2W9 205 aaKnown RBP16.41■□□□□ 0.22
SMPD1-205ENST00000531303 SLC25A40Q8TBP6 338 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 CHCHD6Q9BRQ6 235 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 OR2J1Q9GZK6 312 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 POU2F3Q9UKI9 436 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 HHLA2Q9UM44 414 aa16.41■□□□□ 0.22
SMPD1-205ENST00000531303 KLF2Q9Y5W3 355 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-205ENST00000531303 ABCA4P78363 2273 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 A0A1W2PPK0 400 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 CLEC18AA5D8T8 446 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 A6NIN4 97 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 IGFBP2P18065 325 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 PSMA1P25786 263 aaKnown RBP16.4■□□□□ 0.22
SMPD1-205ENST00000531303 RPS11P62280 158 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMPD1-205ENST00000531303 FABP5Q01469 135 aa16.4■□□□□ 0.22
SMPD1-205ENST00000531303 GK2Q14410 553 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-205ENST00000531303 YIF1BQ5BJH7 314 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms