RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 AIG1Q9NVV5 245 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 KAAG1Q9UBP8 84 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 ANGPT4Q9Y264 503 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 LSM4Q9Y4Z0 139 aaKnown RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 RBMY1BA6NDE4 496 aaKnown RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 RBMY1EA6NEQ0 496 aaKnown RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 NPIPB13A6NJU9 1138 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 C12orf71A8MTZ7 269 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 NPIPB4C9JG80 1138 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 BLOC1S5-TXNDC5H3BN57 136 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 M0R3H8 397 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 SYNGR1O43759 233 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 LYPD3O95274 346 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 ANP32DO95626 131 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 THY1P04216 161 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 HIST1H2ABP04908 130 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 IFNW1P05000 195 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 RBMY1DP0C7P1 496 aaKnown RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 ZCCHC18P0CG32 403 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 LBPP18428 481 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 VDAC2P45880 294 aaPredicted RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 HHATQ5VTY9 493 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 ZNF613Q6PF04 617 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 CCDC121Q6ZUS5 278 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 HIST3H2AQ7L7L0 130 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 FAM216BQ8N7L0 139 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 PCYOX1LQ8NBM8 494 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 NFKBIDQ8NI38 313 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 C8orf46Q8TAG6 207 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 HIST1H2ACQ93077 130 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 ZNF583Q96ND8 569 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 EMC7Q9NPA0 242 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 POLE4Q9NR33 117 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 TMEM100Q9NV29 134 aa6.63□□□□□ -1.35
CD44-232ENST00000531118 TSSC4Q9Y5U2 329 aaPredicted RBP6.63□□□□□ -1.35
CD44-232ENST00000531118 IGHV3OR15-7A0A075B7D8 119 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 OR6C6A6NF89 314 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 SMIM23A6NLE4 172 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 CPSF4LA6NMK7 179 aaKnown RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 SCG5P05408 212 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 DBHP09172 617 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 AQP2P41181 271 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 ELF3P78545 371 aaPredicted RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 DGCR2P98153 550 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 FADDQ13158 208 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 CNN3Q15417 329 aaKnown RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 RGNQ15493 299 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 TCTEX1D4Q5JR98 221 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 TEX36Q5VZQ5 186 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 HCP5Q6MZN7 132 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 OGFOD2Q6N063 350 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 TTC33Q6PID6 262 aaPredicted RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 GCSAMQ8N6F7 178 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 ZNF781Q8N8C0 355 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 MOSPD2Q8NHP6 518 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 APOBEC3DQ96AK3 386 aaPredicted RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 ZBTB18Q99592 522 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 MCHR1Q99705 422 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 ADAT1Q9BUB4 502 aaKnown RBP6.62□□□□□ -1.35
CD44-232ENST00000531118 ZNF426Q9BUY5 554 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 SPATA5L1Q9BVQ7 753 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 MEGF9Q9H1U4 602 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 RAD21L1Q9H4I0 556 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 WDR76Q9H967 626 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 ATPIF1Q9UII2 106 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 SLC13A4Q9UKG4 626 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 TCF19Q9Y242 345 aa6.62□□□□□ -1.35
CD44-232ENST00000531118 TCRBV4S1A1TA0A5B7 111 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PRORSD1PA6NEY8 169 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 M0R1W7 72 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 OR7A10O76100 309 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PTBP3O95758 552 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 LHBP01229 141 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 ALDOBP05062 364 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 SERPINE1P05121 402 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 FAM153BP0C7A2 387 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PAICSP22234 425 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 CHATP28329 748 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 AQP6Q13520 282 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 NPTX1Q15818 432 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 WDR38Q5JTN6 314 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 ENTPD8Q5MY95 495 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 GCNT6Q5T4J0 391 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 TMEM219Q86XT9 240 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 KRT73Q86Y46 540 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 OR5AU1Q8NGC0 362 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 OR5L1Q8NGL2 311 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PFN4Q8NHR9 129 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PIFOQ8TCI5 191 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 ACOT11Q8WXI4 607 aaPredicted RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 TFAP2CQ92754 450 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 MYDGFQ969H8 173 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 RBMXL1Q96E39 390 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 PRR25Q96S07 402 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 WACQ9BTA9 647 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms