RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), human

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-231	ENST00000531110	AHSA2	Q719I0	299 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	HIST3H2A	Q7L7L0	130 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SLC36A1	Q7Z2H8	476 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SFTPA2	Q8IWL1	248 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	FBXL14	Q8N1E6	418 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	ZNF738	Q8NE65	137 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PROKR2	Q8NFJ6	384 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR9K2	Q8NGE7	335 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR5AP2	Q8NGF4	316 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR10D4P	Q8NGN7	298 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR1J4	Q8NGS1	313 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR1J1	Q8NGS3	322 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR2T35	Q8NGX2	323 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	OR5AK3P	Q8NH89	298 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	CCDC107	Q8WV48	283 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	GGH	Q92820	318 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	HIST1H2AC	Q93077	130 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	MIB2	Q96AX9	1013 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PGAM5	Q96HS1	289 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PYURF	Q96I23	114 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SLC35E1	Q96K37	410 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	FER1L6-AS2	Q96M78	137 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	ZNF583	Q96ND8	569 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	F2RL3	Q96RI0	385 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SLC6A7	Q99884	636 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SYT17	Q9BSW7	474 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	TAPBPL	Q9BX59	468 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	KRTAP17-1	Q9BYP8	105 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PRRG3	Q9BZD7	231 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	RAB6C	Q9H0N0	254 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	SLCO5A1	Q9H2Y9	848 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	MAGIX	Q9H6Y5	334 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	TMEM185B	Q9H7F4	350 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	ACKR4	Q9NPB9	350 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	YAE1D1	Q9NRH1	226 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	UQCC1	Q9NVA1	299 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PLEKHJ1	Q9NW61	149 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	CNOT2	Q9NZN8	540 aa	Known RBP	4.94	□□□□□ -1.62
CD44-231	ENST00000531110	ZNF222	Q9UK12	451 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	A4GNT	Q9UNA3	340 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	ST3GAL6	Q9Y274	331 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	GSTK1	Q9Y2Q3	226 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	RBM7	Q9Y580	266 aa	Known RBP	4.94	□□□□□ -1.62
CD44-231	ENST00000531110	UBIAD1	Q9Y5Z9	338 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	TNS3	Q68CZ2	1445 aa		4.94	□□□□□ -1.62
CD44-231	ENST00000531110	PLIN4	Q96Q06	1357 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	LOC105371242	A0A075B767	164 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110		A0A087WWC5	75 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	IGHV4-28	A0A0C4DH34	117 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	KLF18	A0A0U1RQI7	1052 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	HYKK	A2RU49	373 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR2M5	A3KFT3	312 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ZNF726	A6NNF4	738 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110		G3V3Y1	287 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CTSV	O60911	334 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CA11	O75493	328 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR2F2	O95006	317 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	LRAT	O95237	230 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CLIC3	O95833	236 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	IGSF6	O95976	241 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CD5	P06127	495 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	GZMB	P10144	247 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	GABRB1	P18505	474 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	TUBG1	P23258	451 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	AMT	P48728	403 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ARRB1	P49407	418 aa	Predicted RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	NPY4R	P50391	375 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	METAP2	P50579	478 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	RAB28	P51157	221 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR4D2	P58180	307 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CSNK2A1	P68400	391 aa	Predicted RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	SLC35A1	P78382	337 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ZXDB	P98169	803 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	EFNB1	P98172	346 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CRYZ	Q08257	329 aa	Known RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	NFATC2	Q13469	925 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR5I1	Q13606	314 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR2F1	Q13607	317 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	QSER1	Q2KHR3	1735 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	QRICH1	Q2TAL8	776 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CTU2	Q2VPK5	515 aa	Known RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ERCC6L2	Q5T890	1561 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	SERTAD4-AS1	Q5TG53	156 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	LIPK	Q5VXJ0	399 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CST9	Q5W186	159 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	PRR27	Q6MZM9	219 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	TBPL2	Q6SJ96	375 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	HEPN1	Q6WQI6	88 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ACOT7L	Q6ZUV0	252 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	GOLGA7	Q7Z5G4	137 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	ABI3BP	Q7Z7G0	1075 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.93	□□□□□ -1.62
CD44-231	ENST00000531110	SERPINA9	Q86WD7	417 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	LGI3	Q8N145	548 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	OR6V1	Q8N148	313 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110		Q8N402	240 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	BPIFB2	Q8N4F0	458 aa		4.93	□□□□□ -1.62
CD44-231	ENST00000531110	EID2	Q8N6I1	236 aa		4.93	□□□□□ -1.62

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