RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 OR9Q2Q8NGE9 314 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 OR11L1Q8NGX0 322 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 OR2T4Q8NH00 348 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 ZNRF4Q8WWF5 429 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 BTBD10Q9BSF8 475 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 UFSP2Q9NUQ7 469 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 IL20Q9NYY1 176 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 SOX21Q9Y651 276 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-205ENST00000531042 MEGF8Q7Z7M0 2845 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 TVP23AA6NH52 213 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 CD300LBA8K4G0 201 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 CLDN34H7C241 214 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
CPSF1-205ENST00000531042 PSKH1P11801 424 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 CA6P23280 308 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 ANOS1P23352 680 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-205ENST00000531042 MTNR1AP48039 350 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF92Q03936 586 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 SLC9A3R2Q15599 337 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 OR8G1Q15617 311 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 SNAI3Q3KNW1 292 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 WDR25Q64LD2 544 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-205ENST00000531042 C16orf89Q6UX73 402 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF841Q6ZN19 808 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 FITM2Q8N6M3 262 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 C19orf18Q8NEA5 215 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 OR8D4Q8NGM9 314 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 NUDT16L1Q9BRJ7 211 aaKnown RBP13.16□□□□□ -0.3
CPSF1-205ENST00000531042 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 NDE1Q9NXR1 346 aa13.16□□□□□ -0.3
CPSF1-205ENST00000531042 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
CPSF1-205ENST00000531042 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 PHYHO14832 338 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 GMDSO60547 372 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 PTBP3O95758 552 aaKnown RBP13.15□□□□□ -0.3
CPSF1-205ENST00000531042 GASTP01350 101 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 PSMB10P40306 273 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF770Q6IQ21 691 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-205ENST00000531042 LYPD4Q6UWN0 246 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 CYP2R1Q6VVX0 501 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 DCXRQ7Z4W1 244 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 SLC37A3Q8NCC5 494 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 OR2AE1Q8NHA4 323 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 ADAT1Q9BUB4 502 aaKnown RBP13.15□□□□□ -0.3
CPSF1-205ENST00000531042 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
CPSF1-205ENST00000531042 GGT3PA6NGU5 568 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 ATP6V1B2P21281 511 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 MAGEA2P43356 314 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 MXRA7P84157 204 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-205ENST00000531042 PCK2Q16822 640 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 LNX2Q8N448 690 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 OR9Q1Q8NGQ5 310 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 FN3KRPQ9HA64 309 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 MRPL15Q9P015 296 aaKnown RBP13.14□□□□□ -0.31
CPSF1-205ENST00000531042 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 MGAM2Q2M2H8 2515 aa13.14□□□□□ -0.31
CPSF1-205ENST00000531042 C22orf46C9J442 243 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 DCTN3O75935 186 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 CCNB2O95067 398 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 FMO3P31513 532 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 ENTPD1P49961 510 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 NPY4RP50391 375 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 PRKXP51817 358 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 FGF12P61328 243 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 PPP1R8Q12972 351 aaKnown RBP13.13□□□□□ -0.31
CPSF1-205ENST00000531042 KCNJ8Q15842 424 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 TEX30Q5JUR7 227 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 SFRP4Q6FHJ7 346 aaPredicted RBP13.13□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 SLAMF6Q96DU3 332 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 KCNJ15Q99712 375 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 COPS4Q9BT78 406 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 TSSK6Q9BXA6 273 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 CTSZQ9UBR2 303 aa13.13□□□□□ -0.31
CPSF1-205ENST00000531042 MDFIC2A0A1B0GVS7 189 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 TCRBV5S2A0A599 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms