RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TMEM255AQ5JRV8 349 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 LIPNQ5VXI9 398 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 FDX2Q6P4F2 183 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 LHFPL3Q86UP9 236 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 LRP11Q86VZ4 500 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 SGK3Q96BR1 496 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 MRPL48Q96GC5 212 aaKnown RBP13.74□□□□□ -0.21
BRK1-201ENST00000530758 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 RHNO1Q9BSD3 238 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 OPA3Q9H6K4 179 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 G6PC2Q9NQR9 355 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 ZNF701Q9NV72 531 aaPredicted RBP13.74□□□□□ -0.21
BRK1-201ENST00000530758 UBAP1Q9NZ09 502 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 ZNF319Q9P2F9 582 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 ZNF391Q9UJN7 358 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 R4GMQ9 66 aa13.74□□□□□ -0.21
BRK1-201ENST00000530758 CHD3Q12873 2000 aaKnown RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 A0A0U1RQV5 110 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 H7C417 338 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 CLPTM1O96005 669 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 PNPP00491 289 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 SLC2A1P11166 492 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 BMP4P12644 408 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 GCH1P30793 250 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 LIPAP38571 399 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 MPV17P39210 176 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 SLC35A2P78381 396 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 MALLQ13021 153 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 GK2Q14410 553 aaPredicted RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 ZNF829Q3KNS6 432 aaPredicted RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 RBM48Q5RL73 367 aaKnown RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 YIPF7Q8N8F6 280 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 ZNF540Q8NDQ6 660 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 HAVCR2Q8TDQ0 301 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 RORBQ92753 470 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 CMBLQ96DG6 245 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 SIGLEC11Q96RL6 698 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 CCL19Q99731 98 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 ALG8Q9BVK2 526 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 TTTY10Q9BZA0 68 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 MOB1AQ9H8S9 216 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 CGGBP1Q9UFW8 167 aaPredicted RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 NUFIP1Q9UHK0 495 aaKnown RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 EXOSC1Q9Y3B2 195 aaKnown RBP13.73□□□□□ -0.21
BRK1-201ENST00000530758 TPRKBQ9Y3C4 175 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 SNX5Q9Y5X3 404 aa13.73□□□□□ -0.21
BRK1-201ENST00000530758 A0A1B0GWJ7 208 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 ANXA2P07355 339 aaKnown RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 CRHBPP24387 322 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 DNASE1P24855 282 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 PPOXP50336 477 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 ETV1P50549 477 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 MMP15P51511 669 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 OR12D2P58182 307 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 MVKQ03426 396 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 ZNF92Q03936 586 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 MRPL28Q13084 256 aaKnown RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 TESK1Q15569 626 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 GLYATL3Q5SZD4 288 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 SPATA46Q5T0L3 261 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 Q6ZSR3 168 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 FAM57BQ71RH2 274 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 KRT74Q7RTS7 529 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 ZNF485Q8NCK3 441 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 SYT3Q9BQG1 590 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 YTHDF1Q9BYJ9 559 aaKnown RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 PBOV1Q9GZY1 135 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 OR10A2Q9H208 303 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 MS4A5Q9H3V2 200 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 BEX4Q9NWD9 120 aaPredicted RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 PTTG3PQ9NZH4 202 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 GPR160Q9UJ42 338 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 PURGQ9UJV8 347 aaKnown RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 FZR1Q9UM11 496 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 CAB39Q9Y376 341 aaPredicted RBP13.72□□□□□ -0.21
BRK1-201ENST00000530758 PMF1-BGLAPU3KQ54 211 aa13.72□□□□□ -0.21
BRK1-201ENST00000530758 IQCF6A8MYZ5 107 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 CDK1P06493 297 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 ADH4P08319 380 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 SELEP16581 610 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 CFL1P23528 166 aaKnown RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 SNRPD2P62316 118 aaKnown RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 MED21Q13503 144 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 HLXQ14774 488 aaPredicted RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 TP53I3Q53FA7 332 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 PGAP1Q75T13 922 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 FAM220AQ7Z4H9 259 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 CDH24Q86UP0 819 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 ELMOD2Q8IZ81 293 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 LRRC75A-AS1Q8N1F1 130 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 OR8B12Q8NGG6 310 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 MYDGFQ969H8 173 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms