RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PPOXP50336 477 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 IDH3GP51553 393 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 DVL1P1P54792 670 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 SH3BGRP55822 239 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 COPZ1P61923 177 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 NAAAQ02083 359 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 FUT5Q11128 374 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 OR7A5Q15622 319 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 FAM174BQ3ZCQ3 159 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 HIKESHIQ53FT3 197 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 UGT2A3Q6UWM9 527 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TMEM182Q6ZP80 229 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 LRRC74BQ6ZQY2 392 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 HMGN2P46Q86SG4 172 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 ANKRD46Q86W74 232 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF440Q8IYI8 595 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 KIRREL3Q8IZU9 778 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TRIML2Q8N7C3 387 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 UXS1Q8NBZ7 420 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 SLC24A4Q8NFF2 622 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 OR4F15Q8NGB8 312 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 OR1K1Q8NGR3 316 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TCP10LQ8TDR4 215 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 RAB8BQ92930 207 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TESCQ96BS2 214 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 BSCL2Q96G97 398 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 AURKBQ96GD4 344 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 FOXN4Q96NZ1 517 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF317Q96PQ6 595 aaPredicted RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TRNT1Q96Q11 434 aaKnown RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 SLC35A5Q9BS91 424 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 TAPBPLQ9BX59 468 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 BPESC1Q9GZL8 116 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 CACYBPQ9HB71 228 aaKnown RBP4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 CA10Q9NS85 328 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 RHCGQ9UBD6 479 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 IL19Q9UHD0 177 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 PRDM4Q9UKN5 801 aa4.31□□□□□ -1.72
AMBRA1-209ENST00000529963 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 YLPM1P49750 1951 aaKnown RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ARPC4-TTLL3A0A0A6YYG9 625 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 A8MVM7 634 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 E9PBE3 544 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 hCG_2039718K7EN88 272 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 HMGN4O00479 90 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF432O94892 652 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 AKR7A3O95154 331 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 STAMBPO95630 424 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 LGI1O95970 557 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 TFAP2AP05549 437 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 DBIP07108 87 aaKnown RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 BPGMP07738 259 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 CECR9P0C854 216 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 HOXB6P17509 224 aaKnown RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 RPS4Y1P22090 263 aaKnown RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 S100A3P33764 101 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 LRRC74AQ0VAA2 488 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 PLA2G7Q13093 441 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 CEACAM7Q14002 265 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 CASP8Q14790 479 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 LIN52Q52LA3 116 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 SPANXN4Q5MJ08 99 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 GCNT6Q5T4J0 391 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 MRPL2Q5T653 305 aaKnown RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 TMEM225Q6GV28 225 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ETFRF1Q6IPR1 90 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 NIPAL3Q6P499 406 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 TMPRSS11FQ6ZWK6 438 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 SMIM29Q86T20 159 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 RNF130Q86XS8 419 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 NUDCD3Q8IVD9 361 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 TMEM99Q8N816 258 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ZIC4Q8N9L1 334 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 NUP37Q8NFH4 326 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 DMBX1Q8NFW5 382 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 MAGEE2Q8TD90 523 aaPredicted RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 CCDC115Q96NT0 180 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ANKRD27Q96NW4 1050 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ALKBH3Q96Q83 286 aaPredicted RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 SLC38A1Q9H2H9 487 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ZNF442Q9H7R0 627 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 MTHFD2LQ9H903 347 aaPredicted RBP4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 DYNLRB1Q9NP97 96 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 LGALS13Q9UHV8 139 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 BTNL2Q9UIR0 455 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 KCNG2Q9UJ96 466 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 RASD1Q9Y272 281 aa4.3□□□□□ -1.72
AMBRA1-209ENST00000529963 NBEAL2Q6ZNJ1 2754 aa4.29□□□□□ -1.72
AMBRA1-209ENST00000529963 A0A096LPI6 279 aa4.29□□□□□ -1.72
AMBRA1-209ENST00000529963 A0A1W2PS18 150 aa4.29□□□□□ -1.72
AMBRA1-209ENST00000529963 SMIM30A4D0T7 59 aa4.29□□□□□ -1.72
AMBRA1-209ENST00000529963 LRP5LA4QPB2 252 aa4.29□□□□□ -1.72
AMBRA1-209ENST00000529963 SELENOFO60613 162 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms