RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ZNF649Q9BS31 505 aa12□□□□□ -0.49
USF1-209ENST00000529476 ALG8Q9BVK2 526 aa12□□□□□ -0.49
USF1-209ENST00000529476 TUBG2Q9NRH3 451 aa12□□□□□ -0.49
USF1-209ENST00000529476 INPP5EQ9NRR6 644 aa12□□□□□ -0.49
USF1-209ENST00000529476 FAM206AQ9NX38 181 aa12□□□□□ -0.49
USF1-209ENST00000529476 ERVK13-1Q9NX77 482 aa12□□□□□ -0.49
USF1-209ENST00000529476 ZNF319Q9P2F9 582 aa12□□□□□ -0.49
USF1-209ENST00000529476 GNG8Q9UK08 70 aa12□□□□□ -0.49
USF1-209ENST00000529476 TMEM269A0A1B0GVZ9 245 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 EFCAB10A6NFE3 127 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 H3BSA7 217 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 DENRO43583 198 aaKnown RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 PNPP00491 289 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 LIMS3P0CW19 117 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 LIMS4P0CW20 117 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 PIPP12273 146 aaPredicted RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 DNASE1P24855 282 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 DCTDP32321 178 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 CDKN1AP38936 164 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 ALDH3B1P43353 468 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 EVX1P49640 407 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 ETV1P50549 477 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 OR12D2P58182 307 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 SELENOVP59797 346 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 SNRPD2P62316 118 aaKnown RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 ST3GAL4Q11206 333 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 MALLQ13021 153 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 PSG7Q13046 419 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 GALEQ14376 348 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 GK2Q14410 553 aaPredicted RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 ZNF829Q3KNS6 432 aaPredicted RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 LIPNQ5VXI9 398 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 FBXW12Q6X9E4 464 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 ZNF540Q8NDQ6 660 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 PPP1R14AQ96A00 147 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 HAVCR1Q96D42 359 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 TMEM80Q96HE8 168 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 CACNG6Q9BXT2 260 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 Q9H521 79 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 SP140LQ9H930 580 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 ACOXLQ9NUZ1 547 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 UBAP1Q9NZ09 502 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 CNOT2Q9NZN8 540 aaKnown RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 TAAR3PQ9P1P4 343 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 EDARQ9UNE0 448 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 DIMT1Q9UNQ2 313 aaKnown RBP11.99□□□□□ -0.49
USF1-209ENST00000529476 R4GMQ9 66 aa11.99□□□□□ -0.49
USF1-209ENST00000529476 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 J3QLW9 94 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 OVOL3O00110 214 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 IGHV3-13P01766 116 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 RAC2P15153 192 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 ZNF19P17023 458 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 DCKP27707 260 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 PSMB10P40306 273 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 MMP16P51512 607 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 ACTA2P62736 377 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 ACTG2P63267 376 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 CSNK2BP67870 215 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 ZNF92Q03936 586 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 GFOD2Q3B7J2 385 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
USF1-209ENST00000529476 FAM220AQ7Z4H9 259 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 STX19Q8N4C7 294 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 OR8B12Q8NGG6 310 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 OR52H1Q8NGJ2 320 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 SGCDQ92629 289 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 GTF3AQ92664 365 aaKnown RBP11.98□□□□□ -0.49
USF1-209ENST00000529476 RORBQ92753 470 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 PIGTQ969N2 578 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 SGK3Q96BR1 496 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 C4orf36Q96KX1 117 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 SIGLEC11Q96RL6 698 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 PBOV1Q9GZY1 135 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 OR10A2Q9H208 303 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 ISG20L2Q9H9L3 353 aaKnown RBP11.98□□□□□ -0.49
USF1-209ENST00000529476 DYNLRB1Q9NP97 96 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 SCN3BQ9NY72 215 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 PURGQ9UJV8 347 aaKnown RBP11.98□□□□□ -0.49
USF1-209ENST00000529476 GTF2A1LQ9UNN4 478 aa11.98□□□□□ -0.49
USF1-209ENST00000529476 USF3Q68DE3 2245 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 ACOD1A6NK06 481 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 M0R233 179 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 XRCC2O43543 280 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 TIMM8AO60220 97 aaPredicted RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 TACSTD2P09758 323 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 MYL12AP19105 171 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 KITLGP21583 273 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 C21orf33P30042 268 aaPredicted RBP11.97□□□□□ -0.49
USF1-209ENST00000529476 TIGD6Q17RP2 521 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 NKPD1Q17RQ9 610 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 OR2T2Q6IF00 324 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 KCTD20Q7Z5Y7 419 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 OR5AS1Q8N127 324 aa11.97□□□□□ -0.49
USF1-209ENST00000529476 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms