RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FSTL3O95633 263 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 PRR23D2P0DMB1 279 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 PRKACGP22612 351 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 MDH2P40926 338 aaKnown RBP27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 SHFQ7M4L6 423 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 DPY19L4Q7Z388 723 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 TIGD4Q8IY51 512 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 RFLNBQ8N5W9 214 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 RNF133Q8WVZ7 376 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 SPRYD4Q8WW59 207 aaPredicted RBP27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 UTP4Q969X6 686 aaKnown RBP27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 TEX12Q9BXU0 123 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 SLC25A19Q9HC21 320 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 UBAP1Q9NZ09 502 aa27.82■■■□□ 2.04
SSSCA1-205ENST00000527920 PPIAL4EA0A075B759 164 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 PPIAL4CA0A0B4J2A2 164 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 CD300LBA8K4G0 201 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 PPIAL4DF5H284 164 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 PRODHO43272 600 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 PPIAL4FP0DN26 164 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 CPT2P23786 658 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 ZNF92Q03936 586 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 EIF2B1Q14232 305 aaKnown RBP27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 ZMYND11Q15326 602 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 FAHD2BQ6P2I3 314 aaPredicted RBP27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 ERI1Q8IV48 349 aaKnown RBP27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 MUC20Q8N307 709 aaPredicted RBP27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 OR6N2Q8NGY6 317 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 ERGIC1Q969X5 290 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 FAHD2AQ96GK7 314 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 ABHD6Q9BV23 337 aa27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 PATZ1Q9HBE1 687 aaKnown RBP27.81■■■□□ 2.04
SSSCA1-205ENST00000527920 F5H5P2 479 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 CD200P41217 278 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 PRKXP51817 358 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 PRSS12P56730 875 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 HNRNPA0Q13151 305 aaKnown RBP27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 SCGB2A2Q13296 93 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 PLBD1Q6P4A8 553 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 FAHD1Q6P587 224 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 PARP8Q8N3A8 854 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 OTULINQ96BN8 352 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 SP140LQ9H930 580 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 PCDHB10Q9UN67 800 aa27.8■■■□□ 2.04
SSSCA1-205ENST00000527920 LRRC30A6NM36 301 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 XRCC2O43543 280 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 FOXH1O75593 365 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 APOC1P02654 83 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 GLYATL3Q5SZD4 288 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 SPSB4Q96A44 273 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 OR51V1Q9H2C8 321 aa27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 POLR3KQ9Y2Y1 108 aaPredicted RBP27.79■■■□□ 2.04
SSSCA1-205ENST00000527920 TIPRLO75663 272 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 HLA-DPB1P04440 258 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 SLC35D3Q5M8T2 416 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 C1orf87Q8N0U7 546 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 ZNF454Q8N9F8 522 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 OR2AE1Q8NHA4 323 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 Q8TCH9 128 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 PAPOLBQ9NRJ5 636 aaKnown RBP27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 MRPL15Q9P015 296 aaKnown RBP27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 KIF17Q9P2E2 1029 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 METRNQ9UJH8 293 aa27.78■■■□□ 2.04
SSSCA1-205ENST00000527920 F5H0A9 414 aaPredicted RBP27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 GMDSO60547 372 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 ANOS1P23352 680 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 OPRL1P41146 370 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 MAB21L1Q13394 359 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 DCAF12L2Q5VW00 463 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 MOGAT3Q86VF5 341 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 CPOQ8IVL8 374 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 ZNF420Q8TAQ5 688 aaPredicted RBP27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 PLEKHA8Q96JA3 519 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 TMPRSS13Q9BYE2 586 aa27.77■■■□□ 2.04
SSSCA1-205ENST00000527920 C5orf63A6NC05 138 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 GGT3PA6NGU5 568 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 PTBP3O95758 552 aaKnown RBP27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 SLC2A1P11166 492 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 DDOSTP39656 456 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 CX3CR1P49238 355 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 RAD23AP54725 363 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 ATP6AP1Q15904 470 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 LIPNQ5VXI9 398 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 C1orf229Q6ZS94 237 aaPredicted RBP27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 KLBQ86Z14 1044 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 PHC2Q8IXK0 858 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 PLPP7Q8NBV4 271 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 OR5K1Q8NHB7 308 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 OTOSQ8NHW6 89 aa27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 ZMYND19Q96E35 227 aaPredicted RBP27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 DUS3LQ96G46 650 aaKnown RBP27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 METTL17Q9H7H0 456 aaPredicted RBP27.76■■■□□ 2.03
SSSCA1-205ENST00000527920 A8MXK9 166 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 HSD11B1P28845 292 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 LCN2P80188 198 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 OR8G1Q15617 311 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 SPATC1Q76KD6 591 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 ZNF771Q7L3S4 317 aaPredicted RBP27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 PRSS45Q7RTY3 260 aa27.75■■■□□ 2.03
SSSCA1-205ENST00000527920 OR52H1Q8NGJ2 320 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms