RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TUBAL3A6NHL2 446 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 OR6C65A6NJZ3 312 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 LEUTXA8MZ59 168 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 L7N2F9 121 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 DNPH1O43598 174 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ZIC3O60481 467 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 CBR3O75828 277 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 CHRM2P08172 466 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 OR4E1P0C645 316 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 RAET1LQ5VY80 246 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 AWAT2Q6E213 333 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 INTS12Q96CB8 462 aaKnown RBP13.56□□□□□ -0.24
USH1C-207ENST00000527720 SGCZQ96LD1 299 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 GNRHR2Q96P88 292 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 GPR84Q9NQS5 396 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 WDR87Q6ZQQ6 2873 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 WIPF3A6NGB9 483 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 GJE1A6NN92 205 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 MCRIP1C9JLW8 97 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 M0QYG6 137 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 KLK2P20151 261 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 TBPP20226 339 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 H2BFSP57053 126 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 RAC1P63000 192 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ZXDAP98168 799 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 CDNFQ49AH0 187 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 FJX1Q86VR8 437 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ANGPTL5Q86XS5 388 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ZNF283Q8N7M2 679 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 GJC3Q8NFK1 279 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ANGPTL6Q8NI99 470 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 NKD1Q969G9 470 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ELMOD3Q96FG2 381 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ZNF416Q9BWM5 594 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 ZMAT3Q9HA38 289 aaKnown RBP13.56□□□□□ -0.24
USH1C-207ENST00000527720 PRDM6Q9NQX0 595 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 MED12Q93074 2177 aa13.56□□□□□ -0.24
USH1C-207ENST00000527720 NPIPA2E9PIF3 369 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 NPIPA3F8WFD2 350 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 GOSR2O14653 212 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 CXCL2P19875 107 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 SEC61A1P61619 476 aaKnown RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 RNASE10Q5GAN6 216 aaKnown RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 CLVS2Q5SYC1 327 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 TRAPPC6BQ86SZ2 158 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 C1orf210Q8IVY1 113 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 OR10R2Q8NGX6 335 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 MARVELD3Q96A59 401 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 CHST6Q9GZX3 395 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 ZNF160Q9HCG1 818 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 TEX51A0A1B0GUA7 166 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 FCER2P06734 321 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 UBBP0CG47 229 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 ICAM2P13598 275 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 SUCLG1P53597 346 aaKnown RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 GMFBP60983 142 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 SGCAQ16586 387 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 ATPAF1Q5TC12 328 aaPredicted RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 C12orf45Q8N5I9 185 aaPredicted RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 CHST4Q8NCG5 386 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 OR9K2Q8NGE7 335 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 KCNG3Q8TAE7 436 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
USH1C-207ENST00000527720 MRPS28Q9Y2Q9 187 aaKnown RBP13.55□□□□□ -0.24
USH1C-207ENST00000527720 OR14I1A6ND48 311 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 IGLV3-1P01715 115 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 ZNF35P13682 527 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 ABOP16442 354 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 ACP1P24666 158 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 RAB14P61106 215 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 HIST1H3AP68431 136 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 CHAF1BQ13112 559 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 C2orf68Q2NKX9 166 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 HIST2H3PS2Q5TEC6 136 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 HIST2H3AQ71DI3 136 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 TMEM123Q8N131 208 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 ZDHHC22Q8N966 263 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 SLC6A7Q99884 636 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
USH1C-207ENST00000527720 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
USH1C-207ENST00000527720 A0A0U1RQV5 110 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 APOC1P02654 83 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 GSTP1P09211 210 aaKnown RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 SLC2A1P11166 492 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 ZNF24P17028 368 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 LPCAT3Q6P1A2 487 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 OR13C8Q8NGS7 320 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
USH1C-207ENST00000527720 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 FARSAQ9Y285 508 aaKnown RBP13.53□□□□□ -0.24
USH1C-207ENST00000527720 DHHO43323 396 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms