RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ZNF92Q03936 586 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 SNAPC1Q16533 368 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 IL17RELQ6ZVW7 336 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 TMEM186Q96B77 213 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 GAL3ST1Q99999 423 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 LPAR2Q9HBW0 351 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 GCM1Q9NP62 436 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 KRT84Q9NSB2 600 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 HIF1ANQ9NWT6 349 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 DCAF16Q9NXF7 216 aa22.25■■□□□ 1.15
TSPAN4-217ENST00000527644 ISPDA4D126 451 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 IGHV2-70P01814 119 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 APOC1P02654 83 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 HSD11B1P28845 292 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 PTGES3Q15185 160 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 GLYATL3Q5SZD4 288 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 CCDC121Q6ZUS5 278 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 CXXC5Q7LFL8 322 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 AMIGO2Q86SJ2 522 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 ZNF454Q8N9F8 522 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 OR2AE1Q8NHA4 323 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 LRTOMTQ8WZ04 291 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 SLC22A4Q9H015 551 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 GABARAPL1Q9H0R8 117 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 OPA3Q9H6K4 179 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 SP140LQ9H930 580 aa22.24■■□□□ 1.15
TSPAN4-217ENST00000527644 TRAV20A0A0B4J274 112 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 CD300LBA8K4G0 201 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 F5H5P2 479 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 SLC2A1P11166 492 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 SLC2A5P22732 501 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 CX3CR1P49238 355 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 RPS7P62081 194 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 BBS1Q8NFJ9 593 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 OTOSQ8NHW6 89 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 SIGLEC11Q96RL6 698 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 PRRG3Q9BZD7 231 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 NOP16Q9Y3C1 178 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 N6AMT1Q9Y5N5 214 aa22.23■■□□□ 1.15
TSPAN4-217ENST00000527644 C5orf63A6NC05 138 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 GGT3PA6NGU5 568 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 XRCC2O43543 280 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 SELENOFO60613 162 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 HLA-DPB1P04440 258 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 LYNP07948 512 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 SBK2P0C263 348 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 ANOS1P23352 680 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 OPRL1P41146 370 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 MMP16P51512 607 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 HNRNPA0Q13151 305 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 KDM4DQ6B0I6 523 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 CELF2-AS1Q8N7Q2 184 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 AMELYQ99218 206 aa22.22■■□□□ 1.15
TSPAN4-217ENST00000527644 TMEM178BH3BS89 294 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 MITFO75030 526 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 ANXA2P07355 339 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 H2BFMP0C1H6 154 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 THBS2P35442 1172 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 BTG1P62324 171 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 APOFQ13790 326 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 TMEM155Q4W5P6 130 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 LRRC28Q86X40 367 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 THEM6Q8WUY1 208 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 SPSB4Q96A44 273 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 CENPNQ96H22 339 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 UBAP1Q9NZ09 502 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 ENOPH1Q9UHY7 261 aa22.21■■□□□ 1.15
TSPAN4-217ENST00000527644 PLPP2O43688 288 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 GATA4P43694 442 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 RAD23AP54725 363 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 ZNF181Q2M3W8 571 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 SPICQ8N5J4 248 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 OR52H1Q8NGJ2 320 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 ZNF420Q8TAQ5 688 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 TEAD3Q99594 435 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 MRPL15Q9P015 296 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 PCDHB10Q9UN67 800 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 CUBNO60494 3623 aa22.2■■□□□ 1.14
TSPAN4-217ENST00000527644 TBX1O43435 398 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 GMDSO60547 372 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 CA6P23280 308 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 RBMXP38159 391 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 CD200P41217 278 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 NAA10P41227 235 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 MAB21L1Q13394 359 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 OR8G1Q15617 311 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 SLX4IPQ5VYV7 408 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 PRSS45Q7RTY3 260 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 MOGAT3Q86VF5 341 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 KLHL36Q8N4N3 616 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 ERGIC1Q969X5 290 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 SEMA6AQ9H2E6 1030 aa22.19■■□□□ 1.14
TSPAN4-217ENST00000527644 LRRC30A6NM36 301 aa22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 ZAR1LA6NP61 321 aa22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 PRKYO43930 277 aa22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 DDOSTP39656 456 aa22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 MDH2P40926 338 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 ZNF121P58317 390 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-217ENST00000527644 ACTR3P61158 418 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms