RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TMED1Q13445 227 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 TMEM154Q6P9G4 183 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 SHFQ7M4L6 423 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF555Q8NEP9 628 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 OR4F15Q8NGB8 312 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 OR6N2Q8NGY6 317 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 RNF133Q8WVZ7 376 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 TMEM186Q96B77 213 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 LGALS12Q96DT0 336 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 SLAMF6Q96DU3 332 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 COQ7Q99807 217 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 PRRG3Q9BZD7 231 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 YIPF3Q9GZM5 350 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 KCNN2Q9H2S1 579 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 POFUT1Q9H488 388 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 HIF1ANQ9NWT6 349 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 IMPAD1Q9NX62 359 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 PLEK2Q9NYT0 353 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF319Q9P2F9 582 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 MYRFQ9Y2G1 1151 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ATP23Q9Y6H3 246 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 HSPE1-MOB4S4R3N1 261 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 MPZL2O60487 215 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 DOK2O60496 412 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 SRSF10O75494 262 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 ACSM4P0C7M7 580 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 MYF6P23409 242 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 ZFP36P26651 326 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 OPRL1P41146 370 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 PPOXP50336 477 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 RPS7P62081 194 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF91Q05481 1191 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 DOC2BQ14184 412 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 EIF2B1Q14232 305 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 RHOUQ7L0Q8 258 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 GID4Q8IVV7 300 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 NUP37Q8NFH4 326 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 IL17RDQ8NFM7 739 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 GGHQ92820 318 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 CDADC1Q9BWV3 514 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 ANKRD60Q9BZ19 345 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 UNKLQ9H9P5 680 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 MOV10Q9HCE1 1003 aaKnown RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 SLCO1C1Q9NYB5 712 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 H2AFY2Q9P0M6 372 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-204ENST00000526430 ATPIF1Q9UII2 106 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 FBXL3Q9UKT7 428 aa9.28□□□□□ -0.92
NEDD8-204ENST00000526430 IQCMA0A1B0GVH7 501 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 C5orf49A4QMS7 147 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 XPNPEP2O43895 674 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ABHD16AO95870 558 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 CRYAAP02489 173 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 THBS4P35443 961 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 HTR5AP47898 357 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 MTNR1AP48039 350 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 UCP2P55851 309 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 IL5RAQ01344 420 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ROM1Q03395 351 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 PLP2Q04941 152 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 RIN1Q13671 783 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ADIPOQQ15848 244 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 THAP5Q7Z6K1 395 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 SLC35F2Q8IXU6 374 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ALDH16A1Q8IZ83 802 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF786Q8N393 782 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 OR52I1Q8NGK6 324 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 OR2AJ1Q8NGZ0 328 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 THEM6Q8WUY1 208 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 SGCDQ92629 289 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 PPP1R14AQ96A00 147 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 RNFT2Q96EX2 444 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 OR8B4Q96RC9 309 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 CNN2Q99439 309 aaKnown RBP9.27□□□□□ -0.93
NEDD8-204ENST00000526430 KCNJ15Q99712 375 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 VRK1Q99986 396 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-204ENST00000526430 HDHD2Q9H0R4 259 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.93
NEDD8-204ENST00000526430 PLCXD1Q9NUJ7 323 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 FKBP14Q9NWM8 211 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 CLN6Q9NWW5 311 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 MRM2Q9UI43 246 aaKnown RBP9.27□□□□□ -0.93
NEDD8-204ENST00000526430 FBXO9Q9UK97 447 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-204ENST00000526430 STARD10Q9Y365 291 aa9.27□□□□□ -0.93
NEDD8-204ENST00000526430 A0A1W2PQL4 384 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 PSMD9O00233 223 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 DENRO43583 198 aaKnown RBP9.26□□□□□ -0.93
NEDD8-204ENST00000526430 PNPP00491 289 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 PTHP01270 115 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 IGHA1P01876 353 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 LYNP07948 512 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 MSMBP08118 114 aa9.26□□□□□ -0.93
NEDD8-204ENST00000526430 OR2T7P0C7T2 308 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms