RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 FARSAQ9Y285 508 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 RNF11Q9Y3C5 154 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TIMM22Q9Y584 194 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SLC22A7Q9Y694 548 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 WDR87Q6ZQQ6 2873 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PCM1Q15154 2024 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MDC1Q14676 2089 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 HEATR5BQ9P2D3 2071 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 SPEGQ15772 3267 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 TRAV6A0A075B6T7 132 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR6C65A6NJZ3 312 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 L7N2F9 121 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 UBFD1O14562 309 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 RGS16O15492 202 aaPredicted RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 CHST10O43529 356 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 STX11O75558 287 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR4F21O95013 312 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 AKR7A3O95154 331 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 SCELO95171 688 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CLDN9O95484 217 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ETHE1O95571 254 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OTCP00480 354 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 TROVE2P10155 538 aaKnown RBP eCLIP2.83□□□□□ -1.96
CD44-219ENST00000525685 THRBP10828 461 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 COX6A1P12074 109 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ANXA3P12429 323 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 IMPDH1P20839 514 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MMP11P24347 488 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 IGFBP5P24593 272 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 SERPINB1P30740 379 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ALDH3A1P30838 453 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 RANBP1P43487 201 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CAMLGP49069 296 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CCNG1P51959 295 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ARFIP1P53367 373 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PLA2G16P53816 162 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 FOXA1P55317 472 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 RAB38P57729 211 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 DNAJB13P59910 316 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 RAB8AP61006 207 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 LYZP61626 148 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 STXBP1P61764 594 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 SKP1P63208 163 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 BTN3A2P78410 334 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 BDH1Q02338 343 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 CASP8Q14790 479 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MAPRE2Q15555 327 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 DEFB109BQ30KR1 87 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MAJINQ3KP22 176 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 LRRC23Q53EV4 343 aaPredicted RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 KHDRBS2Q5VWX1 349 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 TRIM40Q6P9F5 258 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ZCCHC23Q6ZST2 131 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ABHD13Q7L211 337 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MOB1BQ7L9L4 216 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ERASQ7Z444 233 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CROCCP2Q86T23 111 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 IFNEQ86WN2 208 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 SLC22A9Q8IVM8 553 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 C10orf107Q8IVU9 208 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PRSS58Q8IYP2 241 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 FAM9CQ8IZT9 166 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 BPIFB2Q8N4F0 458 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 BCORP1Q8N888 145 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MINDY2Q8NBR6 621 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR2L5Q8NG80 312 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR4F6Q8NGB9 312 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR52B4Q8NGK2 314 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR51Q1Q8NH59 317 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 TSLPQ969D9 159 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 MCHR2Q969V1 340 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PPP1R14BQ96C90 147 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 C8orf44Q96CB5 159 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 KCNA7Q96RP8 456 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ZNF382Q96SR6 550 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 HBEGFQ99075 208 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 TM2D1Q9BX74 207 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ZNF717Q9BY31 904 aaPredicted RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 COMMD4Q9H0A8 199 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 OR51B5Q9H339 312 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CENPHQ9H3R5 247 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 IKZF5Q9H5V7 419 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 LIN28AQ9H9Z2 209 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 TMBIM4Q9HC24 238 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PNO1Q9NRX1 252 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 FARSBQ9NSD9 589 aaKnown RBP2.83□□□□□ -1.96
CD44-219ENST00000525685 C14orf105Q9NVL8 296 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 STK38LQ9Y2H1 464 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PLLPQ9Y342 182 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 PPIAL4AQ9Y536 164 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 GMPPBQ9Y5P6 360 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 GMEB1Q9Y692 573 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 AP4B1Q9Y6B7 739 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 ANKRD12Q6UB98 2062 aa2.83□□□□□ -1.96
CD44-219ENST00000525685 CNOT1A5YKK6 2376 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 NCOR2Q9Y618 2525 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 AKAP13Q12802 2813 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms