RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 ABHD6Q9BV23 337 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 TVP23BQ9NYZ1 205 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 DNAJC27Q9NZQ0 273 aa10.83□□□□□ -0.68
TRAPPC4-205ENST00000525079 GGT3PA6NGU5 568 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 CD300LBA8K4G0 201 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 TMEM178BH3BS89 294 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 PHF1O43189 567 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 TBX1O43435 398 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 CYB5R3P00387 301 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 ANXA2P07355 339 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 ANPEPP15144 967 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 CA6P23280 308 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 HSD11B1P28845 292 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 PMELP40967 661 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 NAA10P41227 235 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 CX3CR1P49238 355 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 SRP9P49458 86 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 MMP16P51512 607 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 HCCSP53701 268 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 LCN2P80188 198 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 ZMYND11Q15326 602 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 ATP6AP1Q15904 470 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 FAHD1Q6P587 224 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 CXXC5Q7LFL8 322 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 SHFQ7M4L6 423 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 THEM6Q8WUY1 208 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 LRTOMTQ8WZ04 291 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 DVL3Q92997 716 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 NRBF2Q96F24 287 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 SIGLEC11Q96RL6 698 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 MMADHCQ9H3L0 296 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 MARCH7Q9H992 704 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 PCDHB10Q9UN67 800 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 AP4S1Q9Y587 144 aa10.82□□□□□ -0.68
TRAPPC4-205ENST00000525079 TRAV20A0A0B4J274 112 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 RNF212BA8MTL3 300 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 G3V2T6 193 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 M0R129 80 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 CIB2O75838 187 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 H2BFMP0C1H6 154 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 PCMT1P22061 227 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 FASP25445 335 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 SLC15A1P46059 708 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 BTG1P62324 171 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 GRB2P62993 217 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 MAB21L1Q13394 359 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 APOFQ13790 326 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 PTGES3Q15185 160 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 OR8G1Q15617 311 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 FAM201AQ5SY85 155 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 PRAMEF6Q5VXH4 476 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 FAM57BQ71RH2 274 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 LRRC28Q86X40 367 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 RNF133Q8WVZ7 376 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 TEX12Q9BXU0 123 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 SEMA6AQ9H2E6 1030 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 KRT84Q9NSB2 600 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 UFSP2Q9NUQ7 469 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 KLHDC2Q9Y2U9 406 aa10.81□□□□□ -0.68
TRAPPC4-205ENST00000525079 FBN1P35555 2871 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 PRODHO43272 600 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 AVPP01185 164 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 LYNP07948 512 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 MRPL3P09001 348 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 SLC2A5P22732 501 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 RAD23AP54725 363 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 ZNF121P58317 390 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 SEC61A1P61619 476 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 HOXA4Q00056 320 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 MPPED2Q15777 294 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 GFOD2Q3B7J2 385 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 BCDIN3DQ7Z5W3 292 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 KLHL36Q8N4N3 616 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 C19orf18Q8NEA5 215 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 OR56B2PQ8NGI1 322 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 OTOSQ8NHW6 89 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 DNAJC9Q8WXX5 260 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 SGK3Q96BR1 496 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 DUS3LQ96G46 650 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 TOR3AQ9H497 397 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 METTL17Q9H7H0 456 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 G6PC2Q9NQR9 355 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 ZNF319Q9P2F9 582 aa10.8□□□□□ -0.68
TRAPPC4-205ENST00000525079 LOC105371242A0A075B767 164 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 XRCC2O43543 280 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 PRKYO43930 277 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 PNPP00491 289 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 EPHA2P29317 976 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 OPRL1P41146 370 aa10.79□□□□□ -0.68
TRAPPC4-205ENST00000525079 TIGD6Q17RP2 521 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms