RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 RELL2Q8NC24 303 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 OR4K5Q8NGD3 323 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OR8D4Q8NGM9 314 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OR2T29Q8NH02 315 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OR2V1Q8NHB1 315 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 MOSPD2Q8NHP6 518 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 MFSD8Q8NHS3 518 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ZPLD1Q8TCW7 415 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RNF128Q8TEB7 428 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 DNAJA4Q8WW22 397 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 FCAMRQ8WWV6 532 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LIPHQ8WWY8 451 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ACOT11Q8WXI4 607 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 TMEM234Q8WY98 164 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 LZICQ8WZA0 190 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OSTF1Q92882 214 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 SLC25A36Q96CQ1 311 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 DDIT4LQ96D03 193 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RSRC1Q96IZ7 334 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 OR5B2Q96R09 309 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PIP5K1AQ99755 562 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 OPRPNQ99935 248 aaPredicted RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 NIPSNAP1Q9BPW8 284 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TTYH2Q9BSA4 534 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TMEM43Q9BTV4 400 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 POTEKPQ9BYX7 375 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 PLA2G12AQ9BZM1 189 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 POLR2J2Q9GZM3 115 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 POLR2J3Q9H1A7 115 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 SEMA6AQ9H2E6 1030 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ARMC7Q9H6L4 198 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 EGLN3Q9H6Z9 239 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 EXO5Q9H790 373 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RNF122Q9H9V4 155 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TMEM27Q9HBJ8 222 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 S100A14Q9HCY8 104 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 FANCFQ9NPI8 374 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 AGPAT4Q9NRZ5 378 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ARMC1Q9NVT9 282 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 KLHL28Q9NXS3 571 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TAS2R5Q9NYW4 299 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RPS6KB2Q9UBS0 482 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 IL20RAQ9UHF4 553 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 CLEC4AQ9UMR7 237 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 RNF6Q9Y252 685 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 SIGLEC7Q9Y286 467 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 SLC9A8Q9Y2E8 581 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 MEMO1Q9Y316 297 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 AP4S1Q9Y587 144 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
CSDE1-208ENST00000524652 ABCA4P78363 2273 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
CSDE1-208ENST00000524652 TLN2Q9Y4G6 2542 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 IGKV1D-43A0A0B4J1Z2 117 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 A0A1W2PNV4 684 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 A0A1W2PPI3 338 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 NKX2-6A6NCS4 301 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SLC22A20A6NK97 555 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 E9PQ18 207 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 C11orf98E9PRG8 122 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 IFNL4K9M1U5 179 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SULT2B1O00204 365 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CCL21O00585 134 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 DLGAP1O14490 977 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PLPP3O14495 311 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 HS3ST1O14792 307 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 LDLRAD4O15165 306 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CLOCKO15516 846 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ARHGEF9O43307 516 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TRAF3IP2O43734 574 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR10H3O60404 316 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MITFO75030 526 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SS18L1O75177 396 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PTP4A3O75365 173 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CRLF1O75462 422 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 GMNNO75496 209 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CIB2O75838 187 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR7A10O76100 309 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 RCBTB2O95199 551 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SOX14O95416 240 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 AHSA1O95433 338 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 IGF2P01344 180 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PSKH1P11801 424 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 IFI30P13284 250 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 UQCRBP14927 111 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 AGTR1P30556 359 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 POLR2IP36954 125 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 AQP2P41181 271 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 RBM34P42696 430 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 GSSP48637 474 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CLK1P49759 484 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CARD18P57730 90 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR2B6P58173 313 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SIRPAP78324 504 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PPP2R2BQ00005 443 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 RPL18Q07020 188 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TFF3Q07654 80 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SNTB1Q13884 538 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SLC17A1Q14916 467 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms