RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 OR5AS1Q8N127 324 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 RHOXF1Q8NHV9 184 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 FAM81AQ8TBF8 368 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 SNX33Q8WV41 574 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 RNF166Q96A37 237 aaPredicted RBP10.13□□□□□ -0.79
CLN8-207ENST00000524258 CHODLQ9H9P2 273 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 ZNF275Q9NSD4 429 aaPredicted RBP10.13□□□□□ -0.79
CLN8-207ENST00000524258 FAM118AQ9NWS6 357 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 DCAF16Q9NXF7 216 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 DNAJC27Q9NZQ0 273 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 WARS2Q9UGM6 360 aaKnown RBP10.13□□□□□ -0.79
CLN8-207ENST00000524258 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 LRP12Q9Y561 859 aa10.13□□□□□ -0.79
CLN8-207ENST00000524258 CD300LBA8K4G0 201 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 ENTPD6O75354 484 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 IGLV3-1P01715 115 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 HEXAP06865 529 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 ERCC1P07992 297 aaPredicted RBP10.12□□□□□ -0.79
CLN8-207ENST00000524258 H2BFMP0C1H6 154 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 USF1P22415 310 aaPredicted RBP10.12□□□□□ -0.79
CLN8-207ENST00000524258 DCTDP32321 178 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 TMEM33P57088 247 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 CDC42P60953 191 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 FAM3AP98173 230 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 TMED1Q13445 227 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 TRIP10Q15642 601 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 TMEM249Q2WGJ8 235 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 LPCAT4Q643R3 524 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 USP51Q70EK9 711 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 SSX6Q7RTT6 188 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 ZNF283Q8N7M2 679 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 C1orf159Q96HA4 380 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 OR8B4Q96RC9 309 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 CNN2Q99439 309 aaKnown RBP10.12□□□□□ -0.79
CLN8-207ENST00000524258 PIMREGQ9BSJ6 248 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 FAM206AQ9NX38 181 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 NKX1-2Q9UD57 310 aaPredicted RBP10.12□□□□□ -0.79
CLN8-207ENST00000524258 MRM2Q9UI43 246 aaKnown RBP10.12□□□□□ -0.79
CLN8-207ENST00000524258 LAMP5Q9UJQ1 280 aa10.12□□□□□ -0.79
CLN8-207ENST00000524258 C2CD3Q4AC94 2353 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 IGHV1-69-2A0A0G2JMI3 117 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 LOC100130705A0A1B0GUX0 176 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 hCG_38984A0A1B0GV85 526 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PLSCR5A0PG75 271 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PSMD9O00233 223 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 MAGEB4O15481 346 aaPredicted RBP10.11□□□□□ -0.79
CLN8-207ENST00000524258 CDC14BO60729 498 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PTBP3O95758 552 aaKnown RBP10.11□□□□□ -0.79
CLN8-207ENST00000524258 PNPP00491 289 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 MT-ND5P03915 603 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 IGHV4-31P0DP07 118 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PEX2P28328 305 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 IL2RGP31785 369 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PMELP40967 661 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 SLC6A9P48067 706 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PSMA6P60900 246 aaKnown RBP10.11□□□□□ -0.79
CLN8-207ENST00000524258 MAB21L1Q13394 359 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 TAF13Q15543 124 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 OGFRL1Q5TC84 451 aaPredicted RBP10.11□□□□□ -0.79
CLN8-207ENST00000524258 CLEC9AQ6UXN8 241 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 FAM57BQ71RH2 274 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PGAP1Q75T13 922 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 SLC35F2Q8IXU6 374 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 ZNF679Q8IYX0 411 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 APH1BQ8WW43 257 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 ITLN1Q8WWA0 313 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 ASB17Q8WXJ9 295 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 STMN2Q93045 179 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PPP1R14AQ96A00 147 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 RDH12Q96NR8 316 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 MNTQ99583 582 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 APOL4Q9BPW4 351 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 NIPAL2Q9H841 368 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 SAP30LQ9HAJ7 183 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 H2AFY2Q9P0M6 372 aaPredicted RBP10.11□□□□□ -0.79
CLN8-207ENST00000524258 IL19Q9UHD0 177 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 ORC6Q9Y5N6 252 aa10.11□□□□□ -0.79
CLN8-207ENST00000524258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.795e-6■□□□□ 9.9
CLN8-207ENST00000524258 SVEP1Q4LDE5 3571 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 A0A1W2PQL4 384 aaPredicted RBP10.1□□□□□ -0.79
CLN8-207ENST00000524258 LRP5LA4QPB2 252 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 ACOD1A6NK06 481 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 XRCC2O43543 280 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 ZNF254O75437 659 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 APOL3O95236 402 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 APOC1P02654 83 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 SELEP16581 610 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 ACKR3P25106 362 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 HSD11B1P28845 292 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 MMP16P51512 607 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 CXCR4P61073 352 aa10.1□□□□□ -0.79
CLN8-207ENST00000524258 ISL1P61371 349 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms