RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 WDFY2Q96P53 400 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-204ENST00000521331 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 ATF6BQ99941 703 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 HOPXQ9BPY8 73 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-204ENST00000521331 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
PRKDC-204ENST00000521331 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 NDUFAB1O14561 156 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 GMDSO60547 372 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
PRKDC-204ENST00000521331 RENP00797 406 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 SLC7A2P52569 658 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 TPTEP56180 551 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 PRSS12P56730 875 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 MPPED2Q15777 294 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 C11orf91Q3C1V1 193 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 MRPL21Q7Z2W9 205 aaKnown RBP12.34□□□□□ -0.43
PRKDC-204ENST00000521331 LINC00346Q8IVM7 164 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 UBE2FQ969M7 185 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
PRKDC-204ENST00000521331 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 CTSZQ9UBR2 303 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 CYB5R1Q9UHQ9 305 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
PRKDC-204ENST00000521331 IGHV1-69DA0A0B4J2H0 117 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 NME4O00746 187 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 ARPC3O15145 178 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 ADAM20O43506 726 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 IGHV1-69P01742 117 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 CA6P23280 308 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 SLC6A6P31641 620 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 GSK3BP49841 420 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKDC-204ENST00000521331 OR8B8Q15620 311 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-204ENST00000521331 SPERTQ8NA61 448 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 SPTSSAQ969W0 71 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 RBM4BQ9BQ04 359 aaKnown RBP12.33□□□□□ -0.44
PRKDC-204ENST00000521331 ADAT1Q9BUB4 502 aaKnown RBP12.33□□□□□ -0.44
PRKDC-204ENST00000521331 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
PRKDC-204ENST00000521331 ARMCX1Q9P291 453 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
PRKDC-204ENST00000521331 PRKDCP78527 4128 aaKnown RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 OOEPA6NGQ2 149 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 M0R135 149 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 GPR137BO60478 399 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 CLPXO76031 633 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 ECDO95905 644 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 HIST1H1CP16403 213 aaKnown RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 GGT2P36268 569 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 MZT1Q08AG7 82 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 KRT72Q14CN4 511 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 SEC23BQ15437 767 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 TAF9Q16594 264 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 RFX4Q33E94 735 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 ZBTB46Q86UZ6 589 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 LHX4Q969G2 390 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 ZNF799Q96GE5 643 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 KCTD14Q9BQ13 255 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 SIRPDQ9H106 197 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
PRKDC-204ENST00000521331 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
PRKDC-204ENST00000521331 GGT3PA6NGU5 568 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 IDH3BO43837 385 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 COX4I1P13073 169 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 NCK1P16333 377 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 NOS3P29474 1203 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 SMIM11AP58511 58 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 KRTAP10-3P60369 221 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 HOXA4Q00056 320 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-204ENST00000521331 C8orf82Q6P1X6 216 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-204ENST00000521331 HACD2Q6Y1H2 254 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 LRTOMTQ8WZ04 291 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 C7orf34Q96L11 122 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 PKP2Q99959 881 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 FUZQ9BT04 418 aa12.31□□□□□ -0.44
PRKDC-204ENST00000521331 IFT27Q9BW83 186 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms