RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 CA6P23280 308 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 RPS27P42677 84 aaKnown RBP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 FGF12P61328 243 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 MPPED2Q15777 294 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 SAMD4BQ5PRF9 694 aaKnown RBP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 BRD3OSQ6XYD6 125 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 BOLLQ8N9W6 283 aaKnown RBP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 CYB561A3Q8NBI2 242 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 OR52L1Q8NGH7 329 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 TAF15Q92804 592 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 TECTBQ96PL2 329 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 ADAT1Q9BUB4 502 aaKnown RBP12.64□□□□□ -0.39
CSMD1-207ENST00000520451 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 EGLN3Q9H6Z9 239 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 ZNF696Q9H7X3 374 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 FN3KRPQ9HA64 309 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 IL1RAPQ9NPH3 570 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
CSMD1-207ENST00000520451 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 C22orf46C9J442 243 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
CSMD1-207ENST00000520451 ZNF92Q03936 586 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 ZNF841Q6ZN19 808 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 SPATC1Q76KD6 591 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 ZDHHC21Q8IVQ6 265 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 PGAM4Q8N0Y7 254 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 OR2T4Q8NH00 348 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 CDRT15Q96T59 188 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 RNF7Q9UBF6 113 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 CD300AQ9UGN4 299 aa12.63□□□□□ -0.39
CSMD1-207ENST00000520451 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 LGALS8O00214 317 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 BHLHE40O14503 412 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-207ENST00000520451 SNX3O60493 162 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 GMDSO60547 372 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 PSKH1P11801 424 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 ANOS1P23352 680 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 PSMB10P40306 273 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 OR8B8Q15620 311 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 GPR157Q5UAW9 335 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 SFRP4Q6FHJ7 346 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-207ENST00000520451 RPL13AP3Q6NVV1 102 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 C16orf87Q6PH81 154 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 OR9Q2Q8NGE9 314 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 OR51L1Q8NGJ5 315 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 ZNRF4Q8WWF5 429 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 PCGF1Q9BSM1 259 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 COPS4Q9BT78 406 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
CSMD1-207ENST00000520451 C5orf63A6NC05 138 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 KRT36O76013 467 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 MDKP21741 143 aaPredicted RBP12.61□□□□□ -0.39
CSMD1-207ENST00000520451 OMGP23515 440 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 OTX1P32242 354 aaPredicted RBP12.61□□□□□ -0.39
CSMD1-207ENST00000520451 NPY4RP50391 375 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 RUSC1-AS1Q66K80 236 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 DRAM2Q6UX65 266 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 DCXRQ7Z4W1 244 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 OR4C15Q8NGM1 316 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 OR9Q1Q8NGQ5 310 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 TMIGD2Q96BF3 282 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 DDOQ99489 341 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 BTBD10Q9BSF8 475 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 TNFRSF19Q9NS68 423 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 MRPL15Q9P015 296 aaKnown RBP12.61□□□□□ -0.39
CSMD1-207ENST00000520451 KIF17Q9P2E2 1029 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 ERVK-18Q9QC07 812 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 DOCK11Q5JSL3 2073 aa12.61□□□□□ -0.39
CSMD1-207ENST00000520451 A6NLC8 198 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 KCNAB3O43448 404 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 ADAM20O43506 726 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 PTBP3O95758 552 aaKnown RBP12.6□□□□□ -0.39
CSMD1-207ENST00000520451 SFTPBP07988 381 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 SPARCP09486 303 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 SLC2A1P11166 492 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 CFHR2P36980 270 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 PRKXP51817 358 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 BPIFB3P59826 476 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 TAF13Q15543 124 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
CSMD1-207ENST00000520451 LNX2Q8N448 690 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms