RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 AADACL3Q5VUY0 350 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 SLC16A9Q7RTY1 509 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 ADGRE4PQ86SQ3 457 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 FAM71E2Q8N5Q1 922 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF283Q8N7M2 679 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 RCBTB1Q8NDN9 531 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
PABPC1-208ENST00000519004 GLYATL1Q969I3 302 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 RASD2Q96D21 266 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
PABPC1-208ENST00000519004 MRPS18BQ9Y676 258 aaKnown RBP12.12□□□□□ -0.47
PABPC1-208ENST00000519004 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 MED19A0JLT2 244 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 C4orf47A7E2U8 309 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 M0QZK8 103 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 GGCTO75223 188 aaKnown RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 STATHP02808 62 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 OR5AC1P0C628 307 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 PSMB5P28074 263 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SLC25A1P53007 311 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SUPT4H1P63272 117 aaKnown RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 GLYATL3Q5SZD4 288 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 FBXW9Q5XUX1 488 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 OR2L8Q8NGY9 312 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 MRGPRX4Q96LA9 322 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 NUDT9Q9BW91 350 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 OR52A1Q9UKL2 312 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 RAB22AQ9UL26 194 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 DUXAA6NLW8 204 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 TK1P04183 234 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 CCR4P51679 360 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 PAX5Q02548 391 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 LMAN2Q12907 356 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 NCR3LG1Q68D85 454 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 KDM8Q8N371 416 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 EXD3Q8N9H8 876 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 KREMEN2Q8NCW0 462 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SDF2Q99470 211 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 FAAP24Q9BTP7 215 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 METTL8Q9H825 291 aaKnown RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 MYOTQ9UBF9 498 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 CGGBP1Q9UFW8 167 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-208ENST00000519004 SUSD2Q9UGT4 822 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 IKZF2Q9UKS7 526 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 PADI1Q9ULC6 663 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
PABPC1-208ENST00000519004 A0A0B4J2E0 115 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 A0A1B0GX12 115 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CXCL11O14625 94 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 TGOLN2O43493 480 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF217O75362 1048 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
PABPC1-208ENST00000519004 NID1P14543 1247 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 SERPINA2P20848 420 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 WDR38Q5JTN6 314 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 FAM78AQ5JUQ0 283 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 SLC48A1Q6P1K1 146 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 C4orf45Q96LM5 186 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF681Q96N22 645 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 OR2AG1Q9H205 316 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CHST11Q9NPF2 352 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 TCFL5Q9UL49 500 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 GTF2A1LQ9UNN4 478 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
PABPC1-208ENST00000519004 TCF20Q9UGU0 1960 aaKnown RBP12.1□□□□□ -0.47
PABPC1-208ENST00000519004 KIR2DL5BA0A0G2JN68 375 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 KIR2DL5BA0A0G2JPC4 375 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF264O43296 627 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 IFNA6P05013 189 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CD70P32970 193 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 APOBEC1P41238 236 aaKnown RBP12.1□□□□□ -0.47
PABPC1-208ENST00000519004 GABREP78334 506 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 GXYLT1Q4G148 440 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 BTNL3Q6UXE8 466 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 Q6ZVU0 165 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 RABEPKQ7Z6M1 372 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 KIR2DL5AQ8N109 375 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms