RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LINC01356Q8N9X3 169 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 RNF133Q8WVZ7 376 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 HPS1Q92902 700 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 SPTSSAQ969W0 71 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 MEGF10Q96KG7 1140 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-219ENST00000518824 TTTY10Q9BZA0 68 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 EGLN1Q9GZT9 426 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 BRD7Q9NPI1 651 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 TMEM106BQ9NUM4 274 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 KCNS2Q9ULS6 477 aa11.23□□□□□ -0.61
VEGFA-219ENST00000518824 A0A1B0GWJ7 208 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 CD300LBA8K4G0 201 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 PSMD9O00233 223 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 CX3CR1P49238 355 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 BLVRAP53004 296 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 ZNF121P58317 390 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-219ENST00000518824 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
VEGFA-219ENST00000518824 MAB21L1Q13394 359 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 CR1LQ2VPA4 569 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 CHRFAM7AQ494W8 412 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 FAM120AOSQ5T036 256 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 SLX4IPQ5VYV7 408 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 FAM57BQ71RH2 274 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 PGAP1Q75T13 922 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
VEGFA-219ENST00000518824 ZDHHC13Q8IUH4 622 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 TCEANCQ8N8B7 351 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 CENPNQ96H22 339 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-219ENST00000518824 PLEKHA8Q96JA3 519 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 IL4I1Q96RQ9 567 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 DIRC2Q96SL1 478 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 TEAD3Q99594 435 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
VEGFA-219ENST00000518824 ZNF665Q9H7R5 613 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 COPS3Q9UNS2 423 aa11.22□□□□□ -0.61
VEGFA-219ENST00000518824 ISPDA4D126 451 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 PRODHO43272 600 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 TBX1O43435 398 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 CYB5R3P00387 301 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-219ENST00000518824 IGHV2-70P01814 119 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 IGHV2-5P01817 119 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 ANXA2P07355 339 aaKnown RBP11.21□□□□□ -0.61
VEGFA-219ENST00000518824 FCGR1AP12314 374 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 ALOX5APP20292 161 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 CA6P23280 308 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 MMP16P51512 607 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 ESRRGP62508 458 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 MALLQ13021 153 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 PRAMEF6Q5VXH4 476 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 SHFQ7M4L6 423 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 OR56B2PQ8NGI1 322 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 DNAJC9Q8WXX5 260 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 SGK3Q96BR1 496 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 OSBPL10Q9BXB5 764 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 TMEM100Q9NV29 134 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 TMEM160Q9NX00 188 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 UBAP1Q9NZ09 502 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 PPP1R3CQ9UQK1 317 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 NPTNQ9Y639 398 aa11.21□□□□□ -0.61
VEGFA-219ENST00000518824 EBAG9O00559 213 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 MAGEB4O15481 346 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-219ENST00000518824 LYNP07948 512 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 SBK2P0C263 348 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 TNFSF4P23510 183 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 SEC61A1P61619 476 aaKnown RBP11.2□□□□□ -0.62
VEGFA-219ENST00000518824 GRB2P62993 217 aaKnown RBP11.2□□□□□ -0.62
VEGFA-219ENST00000518824 FAM3AP98173 230 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 SRSF2Q01130 221 aaKnown RBP11.2□□□□□ -0.62
VEGFA-219ENST00000518824 ZMYND11Q15326 602 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 MPPED2Q15777 294 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 SLC35D3Q5M8T2 416 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 AADACL4Q5VUY2 407 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 C19orf18Q8NEA5 215 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 RAB1CQ92928 201 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 UBE2FQ969M7 185 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 MDFIQ99750 246 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 BEX2Q9BXY8 128 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 RIBC2Q9H4K1 309 aa11.2□□□□□ -0.62
VEGFA-219ENST00000518824 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-219ENST00000518824 GGT3PA6NGU5 568 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 B4DSR2 109 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 PLPP2O43688 288 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 AVPP01185 164 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 MSMBP08118 114 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 H2BFMP0C1H6 154 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 TNFRSF1AP19438 455 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 HSD11B1P28845 292 aa11.19□□□□□ -0.62
VEGFA-219ENST00000518824 SLC15A1P46059 708 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms