RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RPS19BP1Q86WX3 136 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 DEFB106AQ8N104 65 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 CADM2Q8N3J6 435 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZDHHC22Q8N966 263 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR5L2Q8NGL0 311 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 C10orf105Q8TEF2 133 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ASZ1Q8WWH4 475 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ANKRD9Q96BM1 317 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 HSFY1Q96LI6 401 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IMMP1LQ96LU5 166 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TIMM29Q9BSF4 260 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TTTY12Q9BZ98 90 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IQCGQ9H095 443 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZDHHC11Q9H8X9 412 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 AGPAT3Q9NRZ7 376 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 SIGLEC8Q9NYZ4 499 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSMC3IPQ9P2W1 217 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSME2Q9UL46 239 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IQANK1A0A1B0GTG1 560 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 BTBD17A6NE02 478 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAM220BPB1ANY3 271 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRDCB7Z8K6 153 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 H7C423 109 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 PFKFB2O60825 505 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 REM1O75628 298 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 UPK3AO75631 287 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CFC1P0CG37 223 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LOXP28300 417 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CD79BP40259 229 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 XCR1P46094 333 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 HLCSP50747 726 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATP12AP54707 1039 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 MS4A2Q01362 244 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC10A1Q14973 349 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 RBMY1FQ15415 496 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CYTH1Q15438 398 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 BCL7AQ4VC05 210 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 EIPR1Q53HC9 387 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LRRC66Q68CR7 880 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR5M10Q6IEU7 315 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ADAM5Q6NVV9 412 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 H3F3CQ6NXT2 135 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SPESP1Q6UW49 350 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LRRC74BQ6ZQY2 392 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM156Q8N614 296 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2T33Q8NG76 320 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAM81AQ8TBF8 368 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZPLD1Q8TCW7 415 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC38A4Q969I6 547 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ECHDC3Q96DC8 303 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CENPKQ9BS16 269 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF670Q9BS34 389 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SFXN3Q9BWM7 321 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIR3DX1Q9H7L2 352 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ADAP2Q9NPF8 381 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLRX2Q9NS18 164 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 C14orf105Q9NVL8 296 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAIMQ9NVQ4 179 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF446Q9NWS9 450 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 EURLQ9NYK6 297 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SPRR3Q9UBC9 169 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 WARS2Q9UGM6 360 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC2A6Q9UGQ3 507 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 MED12LQ86YW9 2145 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGLV3-10A0A075B6K4 115 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PINLYPA6NC86 204 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RPL37AP8A6NKH3 93 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 SULT2B1O00204 365 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DYNC1I1O14576 645 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RNF13O43567 381 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 CDH16O75309 829 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATP5LO75964 103 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 KBTBD11O94819 623 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RENP00797 406 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 FGF4P08620 206 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 IFNA8P32881 189 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 UGT2B10P36537 528 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 HSD17B2P37059 387 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PAX8Q06710 450 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ST3GAL3Q11203 375 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 HNRNPA0Q13151 305 aaKnown RBP3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DPYSL3Q14195 570 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 GNMTQ14749 295 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TIGITQ495A1 244 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 BRMS1LQ5PSV4 323 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF57Q68EA5 555 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 C2orf66Q6UXQ4 117 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF600Q6ZNG1 722 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DHDDSQ86SQ9 333 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ABHD12Q8N2K0 398 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 COMMD1Q8N668 190 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM251Q8N6I4 163 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2M7Q8NG81 312 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 AGR3Q8TD06 166 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms