RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 PRAMEF20Q5VT98 475 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 TTC23LQ6PF05 361 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 METAP1DQ6UB28 335 aaPredicted RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 SPESP1Q6UW49 350 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 RTL4Q6ZR62 310 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 TMEM136Q6ZRR5 245 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 MRPL55Q7Z7F7 128 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZNF664Q8N3J9 261 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR5T1Q8NG75 326 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR9G4Q8NGQ1 327 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR1J4Q8NGS1 313 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 LYPD6BQ8NI32 183 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ENKURQ8TC29 256 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 LRRC29Q8WV35 223 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 EEF1AKMT3Q96AZ1 226 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 TVP23CQ96ET8 276 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 WDR34Q96EX3 536 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 XPO6Q96QU8 1125 aaKnown RBP0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 PLIN2Q99541 437 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 TEAD3Q99594 435 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 CCDC77Q9BR77 488 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 LINC00574Q9H8X3 128 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 ANKRA2Q9H9E1 313 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 RHBDL2Q9NX52 303 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DUX4Q9UBX2 424 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 HPCAL4Q9UM19 191 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 COMMD3-BMI1R4GMX3 469 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DENND4AQ7Z401 1863 aa0.71□□□□□ -2.3
RNU2-56P-201ENST00000516826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 KCNE1BA0A087WTH5 132 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 IGKV2-24A0A0C4DH68 120 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 KBTBD11-OT1A0A1B0GTJ5 212 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 GOLGA6L4A6NEF3 574 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 AP3B1O00203 1094 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 EIF3HO15372 352 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR7C2O60412 319 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CDC40O60508 579 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 NMT2O60551 498 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 RDH16O75452 317 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CIB2O75838 187 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 SNX4O95219 450 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 FSTL3O95633 263 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 IGKV1D-16P01601 117 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 IGLV2-8P01709 118 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 MT-ND4P03905 459 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 GLAP06280 429 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ASGR1P07306 291 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 NELFEP18615 380 aaKnown RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CSNK2A2P19784 350 aaPredicted RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 BCKDHBP21953 392 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 IL32P24001 234 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 STOMP27105 288 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 MPV17P39210 176 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TNFSF9P41273 254 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 PPICP45877 212 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 UBE2E1P51965 193 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 NDUFA8P51970 172 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 EIF3EP60228 445 aaKnown RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 RPS11P62280 158 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 KDSRQ06136 332 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TGM3Q08188 693 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 LRRC74AQ0VAA2 488 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ART3Q13508 389 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 NCF4Q15080 339 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 SNRNP35Q16560 246 aaKnown RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 SLC25A35Q3KQZ1 300 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 HSP90AB3PQ58FF7 597 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CARD17Q5XLA6 110 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZFAND6Q6FIF0 208 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 PRSS54Q6PEW0 395 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TMEM220Q6QAJ8 160 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 DEGS2Q6QHC5 323 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ERO1BQ86YB8 467 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 APRG1Q8IVJ8 170 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZNF547Q8IVP9 402 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CBR4Q8N4T8 237 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CSGALNACT2Q8N6G5 542 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 PQLC3Q8N755 202 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TTC29Q8NA56 475 aaPredicted RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TMEM104Q8NE00 496 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR1P1Q8NH06 330 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR52N1Q8NH53 320 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 OR51E1Q8TCB6 317 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TSEN15Q8WW01 171 aaKnown RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CPNE4Q96A23 557 aaPredicted RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 RPEQ96AT9 228 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 HAUS1Q96CS2 278 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 SGTBQ96EQ0 304 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 FAM19A4Q96LR4 140 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 C18orf15Q96N68 181 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZNF317Q96PQ6 595 aaPredicted RBP0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 CHP1Q99653 195 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TM2D3Q9BRN9 247 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 TMEM243Q9BU79 118 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 C20orf24Q9BUV8 137 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 C1orf50Q9BV19 199 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ANGPTL4Q9BY76 406 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 PLA2G12AQ9BZM1 189 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ZYG11BQ9C0D3 744 aa0.7□□□□□ -2.3
RNU2-56P-201ENST00000516826 ACTR3CQ9C0K3 210 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms