RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 SSMEM1Q8WWF3 244 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 GATAD2BQ8WXI9 593 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 FAM162AQ96A26 154 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 DHRS1Q96LJ7 313 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 WDFY2Q96P53 400 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 TECTBQ96PL2 329 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 NMNAT3Q96T66 252 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 FUZQ9BT04 418 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 MMP27Q9H306 513 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 FN3KRPQ9HA64 309 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 PNRC2Q9NPJ4 139 aaKnown RBP12.46□□□□□ -0.41
DDR1-278ENST00000515233 TRIM36Q9NQ86 728 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 TNFRSF19Q9NS68 423 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 ACOXLQ9NUZ1 547 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 ARMCX1Q9P291 453 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 M0QZ24 198 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 TIMM23O14925 209 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 RENP00797 406 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 COX4I1P13073 169 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 CA6P23280 308 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 GGT2P36268 569 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 TRAP1Q12931 704 aaKnown RBP12.45□□□□□ -0.42
DDR1-278ENST00000515233 PDCD1Q15116 288 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 OR8G1Q15617 311 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 SFRP4Q6FHJ7 346 aaPredicted RBP12.45□□□□□ -0.42
DDR1-278ENST00000515233 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 HACD2Q6Y1H2 254 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 CCT8L2Q96SF2 557 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 TRIM15Q9C019 465 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 MMADHCQ9H3L0 296 aaPredicted RBP12.45□□□□□ -0.42
DDR1-278ENST00000515233 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
DDR1-278ENST00000515233 TRAV38-1A0A0B4J264 116 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 CD300LBA8K4G0 201 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 IDH3BO43837 385 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 CLPXO76031 633 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 NCK1P16333 377 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
DDR1-278ENST00000515233 SLC6A6P31641 620 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 OTX1P32242 354 aaPredicted RBP12.44□□□□□ -0.42
DDR1-278ENST00000515233 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 METTL11BQ5VVY1 283 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 ASPHD2Q6ICH7 369 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 MRPL21Q7Z2W9 205 aaKnown RBP12.44□□□□□ -0.42
DDR1-278ENST00000515233 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 OR52D1Q9H346 318 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
DDR1-278ENST00000515233 DCAF13Q9NV06 445 aaKnown RBP12.44□□□□□ -0.42
DDR1-278ENST00000515233 ABCD2Q9UBJ2 740 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 KCNG2Q9UJ96 466 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 RNF114Q9Y508 228 aa12.44□□□□□ -0.42
DDR1-278ENST00000515233 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 OR6C68A6NDL8 312 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 OOEPA6NGQ2 149 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 M0R135 149 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 ADAM20O43506 726 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 IER3P46695 156 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
DDR1-278ENST00000515233 ZNF92Q03936 586 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 KRT72Q14CN4 511 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 GLYATQ6IB77 296 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 GCSAMQ8N6F7 178 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 SPERTQ8NA61 448 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 OR52J3Q8NH60 311 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 ZNF799Q96GE5 643 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 MAP6Q96JE9 813 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 KCTD14Q9BQ13 255 aaPredicted RBP12.43□□□□□ -0.42
DDR1-278ENST00000515233 SMURF1Q9HCE7 757 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 MRPL22Q9NWU5 206 aaKnown RBP12.43□□□□□ -0.42
DDR1-278ENST00000515233 MRPL15Q9P015 296 aaKnown RBP12.43□□□□□ -0.42
DDR1-278ENST00000515233 KAAG1Q9UBP8 84 aa12.43□□□□□ -0.42
DDR1-278ENST00000515233 SAMD4AQ9UPU9 718 aaKnown RBP12.43□□□□□ -0.42
DDR1-278ENST00000515233 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 DIRAS1O95057 198 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 ECDO95905 644 aaPredicted RBP12.42□□□□□ -0.42
DDR1-278ENST00000515233 LHBP01229 141 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 HLA-DQA2P01906 255 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 NOS3P29474 1203 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 PROK1P58294 105 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 SMIM11AP58511 58 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 DBPQ10586 325 aaPredicted RBP12.42□□□□□ -0.42
DDR1-278ENST00000515233 OR8B8Q15620 311 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 SNAI3Q3KNW1 292 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 LHX4Q969G2 390 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 SPTSSAQ969W0 71 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 DMRTB1Q96MA1 342 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 RBM4BQ9BQ04 359 aaKnown RBP12.42□□□□□ -0.42
DDR1-278ENST00000515233 ADAT1Q9BUB4 502 aaKnown RBP12.42□□□□□ -0.42
DDR1-278ENST00000515233 IFT27Q9BW83 186 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 RASSF4Q9H2L5 321 aa12.42□□□□□ -0.42
DDR1-278ENST00000515233 ARGLU1Q9NWB6 273 aaPredicted RBP12.42□□□□□ -0.42
DDR1-278ENST00000515233 WNK1Q9H4A3 2382 aa12.41□□□□□ -0.42
DDR1-278ENST00000515233 GPR137BO60478 399 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms